RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 RNMTO43148 476 aaKnown RBP20.09■□□□□ 0.81
ATXN2-227ENST00000616825 LMAN1P49257 510 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 TSNARE1Q96NA8 513 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 KCNA6P17658 529 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 KRT83P78385 493 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 PARP3Q9Y6F1 533 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 KRT86O43790 486 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 KRT2P35908 639 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 TYRO3Q06418 890 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 TNNQ9UQP3 1299 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
ATXN2-227ENST00000616825 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
ATXN2-227ENST00000616825 BICDL2A1A5D9 508 aa20.08■□□□□ 0.81
ATXN2-227ENST00000616825 TUBB4AP04350 444 aa20.08■□□□□ 0.81
ATXN2-227ENST00000616825 PPP1R14CQ8TAE6 165 aa20.08■□□□□ 0.81
ATXN2-227ENST00000616825 MRVI1Q9Y6F6 885 aa20.08■□□□□ 0.81
ATXN2-227ENST00000616825 NOLC1Q14978 699 aaKnown RBP eCLIP20.08■□□□□ 0.8
ATXN2-227ENST00000616825 GIGYF2Q6Y7W6 1299 aaKnown RBP20.08■□□□□ 0.8
ATXN2-227ENST00000616825 PRAG1Q86YV5 1406 aa20.08■□□□□ 0.8
ATXN2-227ENST00000616825 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.89e-7■■■■□ 20.5
ATXN2-227ENST00000616825 LMBR1Q8WVP7 490 aa20.08■□□□□ 0.8
ATXN2-227ENST00000616825 CCDC77Q9BR77 488 aa20.08■□□□□ 0.8
ATXN2-227ENST00000616825 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.8
ATXN2-227ENST00000616825 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.8
ATXN2-227ENST00000616825 DYNC1I1O14576 645 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 FAM13AO94988 1023 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 NCBP1Q09161 790 aaKnown RBP20.07■□□□□ 0.8
ATXN2-227ENST00000616825 CLEC11AQ9Y240 323 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 EYA2O00167 538 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 HSF2BPO75031 334 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 CARD14Q9BXL6 1004 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 ATP10BO94823 1461 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 PABPN1LA6NDY0 278 aaKnown RBP20.07■□□□□ 0.8
ATXN2-227ENST00000616825 ARID5AQ03989 594 aa20.07■□□□□ 0.8
ATXN2-227ENST00000616825 HOXC9P31274 260 aa20.06■□□□□ 0.8
ATXN2-227ENST00000616825 TIMM10P62072 90 aa20.06■□□□□ 0.8
ATXN2-227ENST00000616825 FAM89AQ96GI7 184 aa20.06■□□□□ 0.8
ATXN2-227ENST00000616825 ZNF830Q96NB3 372 aaPredicted RBP20.06■□□□□ 0.8
ATXN2-227ENST00000616825 BICC1Q9H694 974 aaKnown RBP20.06■□□□□ 0.8
ATXN2-227ENST00000616825 RBM26Q5T8P6 1007 aaKnown RBP20.06■□□□□ 0.8
ATXN2-227ENST00000616825 VTI1AQ96AJ9 217 aa20.06■□□□□ 0.8
ATXN2-227ENST00000616825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.06■□□□□ 0.83e-8■■□□□ 11.4
ATXN2-227ENST00000616825 STX17P56962 302 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 PLS1Q14651 629 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 DENND2AQ9ULE3 1009 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 ASXL2Q76L83 1435 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 PARP10Q53GL7 1025 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 ATL3Q6DD88 541 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 LRRC45Q96CN5 670 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 SRRTQ9BXP5 876 aaKnown RBP20.05■□□□□ 0.8
ATXN2-227ENST00000616825 MBD4O95243 580 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 MCM7P33993 719 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 RGS22Q8NE09 1264 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 TTC12Q9H892 705 aaPredicted RBP20.05■□□□□ 0.8
ATXN2-227ENST00000616825 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 POLD1P28340 1107 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 GIMAP7Q8NHV1 300 aa20.05■□□□□ 0.8
ATXN2-227ENST00000616825 IQCGQ9H095 443 aaKnown RBP20.05■□□□□ 0.8
ATXN2-227ENST00000616825 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
ATXN2-227ENST00000616825 ATP2A1O14983 1001 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 RIMBP2O15034 1052 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 ZNF790Q6PG37 636 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 DUOX2Q9NRD8 1548 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 A0A1W2PRG0 241 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 NEK11Q8NG66 645 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 FERP16591 822 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 PLCB3Q01970 1234 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 PSMD1Q99460 953 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 RASAL2Q9UJF2 1139 aa20.04■□□□□ 0.8
ATXN2-227ENST00000616825 LUC7L2Q9Y383 392 aaKnown RBP20.04■□□□□ 0.8
ATXN2-227ENST00000616825 HELLSQ9NRZ9 838 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 HOXB7P09629 217 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 SSX2IPQ9Y2D8 614 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 ZNF518AQ6AHZ1 1483 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 RXRAP19793 462 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 NBPF14Q5TI25 921 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 TEX11Q8IYF3 940 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 BACH1O14867 736 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 GNPATO15228 680 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■□□□□ 10.4
ATXN2-227ENST00000616825 RPL13P26373 211 aaKnown RBP20.03■□□□□ 0.8
ATXN2-227ENST00000616825 MCM6Q14566 821 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 PRDM10Q9NQV6 1147 aa20.03■□□□□ 0.8
ATXN2-227ENST00000616825 CTAGE9A4FU28 777 aa20.02■□□□□ 0.8
ATXN2-227ENST00000616825 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
ATXN2-227ENST00000616825 RBM28Q9NW13 759 aaKnown RBP20.02■□□□□ 0.8
ATXN2-227ENST00000616825 RILPL1Q5EBL4 403 aa20.02■□□□□ 0.8
ATXN2-227ENST00000616825 C6orf163Q5TEZ5 329 aa20.02■□□□□ 0.8
ATXN2-227ENST00000616825 ZKSCAN5Q9Y2L8 839 aa20.02■□□□□ 0.8
ATXN2-227ENST00000616825 FBF1Q8TES7 1133 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms