RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 FKBP1AP62942 108 aaKnown RBP27.88■■■□□ 2.05
GTF2F1-204ENST00000594965 ZBED3Q96IU2 234 aaPredicted RBP27.88■■■□□ 2.05
GTF2F1-204ENST00000594965 FAM205AQ6ZU69 1335 aa27.88■■■□□ 2.05
GTF2F1-204ENST00000594965 FBXO3Q9UK99 471 aa27.87■■■□□ 2.05
GTF2F1-204ENST00000594965 PA2G4Q9UQ80 394 aaKnown RBP27.87■■■□□ 2.05
GTF2F1-204ENST00000594965 THSD7BQ9C0I4 1608 aa27.87■■■□□ 2.05
GTF2F1-204ENST00000594965 CIAO1O76071 339 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 SAPCD2Q86UD0 394 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 SULF1Q8IWU6 871 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 SIL1Q9H173 461 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 COPRSQ9NQ92 184 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 PITPNM2Q9BZ72 1349 aa27.86■■■□□ 2.05
GTF2F1-204ENST00000594965 MTX1Q13505 466 aa27.85■■■□□ 2.05
GTF2F1-204ENST00000594965 PUM3Q15397 648 aaKnown RBP27.85■■■□□ 2.05
GTF2F1-204ENST00000594965 HDAC9Q9UKV0 1011 aa27.85■■■□□ 2.05
GTF2F1-204ENST00000594965 SCAF8Q9UPN6 1271 aaKnown RBP27.85■■■□□ 2.05
GTF2F1-204ENST00000594965 WDR33Q9C0J8 1336 aaKnown RBP27.84■■■□□ 2.05
GTF2F1-204ENST00000594965 PCNTO95613 3336 aa27.84■■■□□ 2.05
GTF2F1-204ENST00000594965 HSPA1AP0DMV8 641 aaKnown RBP27.83■■■□□ 2.05
GTF2F1-204ENST00000594965 HSPA1BP0DMV9 641 aaKnown RBP27.83■■■□□ 2.05
GTF2F1-204ENST00000594965 RLBP1P12271 317 aa27.83■■■□□ 2.05
GTF2F1-204ENST00000594965 F8W031 263 aaPredicted RBP27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 BCAMP50895 628 aa27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 CYP4F22Q6NT55 531 aa27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 CDCA5Q96FF9 252 aa27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 IQSEC3Q9UPP2 1182 aaPredicted RBP27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 PCDHAC2Q9Y5I4 1007 aa27.82■■■□□ 2.04
GTF2F1-204ENST00000594965 SRGAP3O43295 1099 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 GNAI2P04899 355 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 IFIT1P09914 478 aaKnown RBP27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 CAVIN4Q5BKX8 364 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 MFSD14BQ5SR56 506 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 MTMR14Q8NCE2 650 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 CAPNS2Q96L46 248 aa27.81■■■□□ 2.04
GTF2F1-204ENST00000594965 IL15P40933 162 aaPredicted RBP27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 VPS37DQ86XT2 251 aa27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 DZIP1LQ8IYY4 767 aaKnown RBP27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 LPIN2Q92539 896 aa27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 HHIPL1Q96JK4 782 aa27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 GBA2Q9HCG7 927 aaPredicted RBP27.8■■■□□ 2.04
GTF2F1-204ENST00000594965 SLC5A1P13866 664 aa27.79■■■□□ 2.04
GTF2F1-204ENST00000594965 CEP126Q9P2H0 1117 aa27.79■■■□□ 2.04
GTF2F1-204ENST00000594965 GRIK5Q16478 980 aa27.78■■■□□ 2.04
GTF2F1-204ENST00000594965 PAXIP1Q6ZW49 1069 aaPredicted RBP27.78■■■□□ 2.04
GTF2F1-204ENST00000594965 AOX1Q06278 1338 aa27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 PNMA6EA0A0J9YXQ4 647 aa27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 ECE1P42892 770 aa27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 DLGAP5Q15398 846 aa27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 CFAP100Q494V2 611 aa27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 FTSJ3Q8IY81 847 aaKnown RBP27.77■■■□□ 2.04
GTF2F1-204ENST00000594965 PAPPA2Q9BXP8 1791 aa27.76■■■□□ 2.03
GTF2F1-204ENST00000594965 CHAF1AQ13111 956 aaPredicted RBP27.76■■■□□ 2.03
GTF2F1-204ENST00000594965 ATP2B3Q16720 1220 aa27.76■■■□□ 2.03
GTF2F1-204ENST00000594965 PRAMEF18Q5VWM3 479 aa27.76■■■□□ 2.03
GTF2F1-204ENST00000594965 PRMT6Q96LA8 375 aaPredicted RBP27.76■■■□□ 2.03
GTF2F1-204ENST00000594965 HUNKP57058 714 aa27.75■■■□□ 2.03
GTF2F1-204ENST00000594965 GRM1Q13255 1194 aa27.75■■■□□ 2.03
GTF2F1-204ENST00000594965 C2orf69Q8N8R5 385 aa27.75■■■□□ 2.03
GTF2F1-204ENST00000594965 TTF2Q9UNY4 1162 aaKnown RBP27.75■■■□□ 2.03
GTF2F1-204ENST00000594965 COL1A1P02452 1464 aaPredicted RBP27.75■■■□□ 2.03
GTF2F1-204ENST00000594965 SPDYE2BA6NHP3 402 aa27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 ZBTB7BO15156 539 aaPredicted RBP27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 SPDYE6P0CI01 402 aa27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 ITPRIPQ8IWB1 547 aa27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 WBP1LQ9NX94 342 aa27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.74■■■□□ 2.03
GTF2F1-204ENST00000594965 AOC2O75106 756 aa27.73■■■□□ 2.03
GTF2F1-204ENST00000594965 FRAT2O75474 233 aaPredicted RBP27.73■■■□□ 2.03
GTF2F1-204ENST00000594965 PANK1Q8TE04 598 aa27.73■■■□□ 2.03
GTF2F1-204ENST00000594965 APOBEC3FQ8IUX4 373 aaKnown RBP27.72■■■□□ 2.03
GTF2F1-204ENST00000594965 TBC1D22AQ8WUA7 517 aa27.72■■■□□ 2.03
GTF2F1-204ENST00000594965 C1orf115Q9H7X2 142 aa27.72■■■□□ 2.03
GTF2F1-204ENST00000594965 SERPINA10Q9UK55 444 aa27.72■■■□□ 2.03
GTF2F1-204ENST00000594965 ADORA1P30542 326 aa27.71■■■□□ 2.03
GTF2F1-204ENST00000594965 TFCP2Q12800 502 aa27.71■■■□□ 2.03
GTF2F1-204ENST00000594965 CLRN2A0PK11 232 aa27.7■■■□□ 2.02
GTF2F1-204ENST00000594965 FOXN1O15353 648 aa27.7■■■□□ 2.02
GTF2F1-204ENST00000594965 RBM5P52756 815 aaKnown RBP eCLIP27.7■■■□□ 2.02
GTF2F1-204ENST00000594965 POLA2Q14181 598 aa27.7■■■□□ 2.02
GTF2F1-204ENST00000594965 RGMBQ6NW40 437 aa27.7■■■□□ 2.02
GTF2F1-204ENST00000594965 MAP2K2P36507 400 aa27.69■■■□□ 2.02
GTF2F1-204ENST00000594965 TIMM10P62072 90 aa27.69■■■□□ 2.02
GTF2F1-204ENST00000594965 ATP8B2P98198 1209 aa27.69■■■□□ 2.02
GTF2F1-204ENST00000594965 MOB2Q70IA6 237 aa27.69■■■□□ 2.02
GTF2F1-204ENST00000594965 FAM155AB1AL88 458 aaPredicted RBP27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 PHKA1P46020 1223 aa27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 CRKP46108 304 aa27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 FKBP1BP68106 108 aa27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 SSH3Q8TE77 659 aa27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 RCAN3Q9UKA8 241 aa27.68■■■□□ 2.02
GTF2F1-204ENST00000594965 MYO1BO43795 1136 aa27.67■■■□□ 2.02
GTF2F1-204ENST00000594965 MAP2K1Q02750 393 aaPredicted RBP27.67■■■□□ 2.02
GTF2F1-204ENST00000594965 ZIC5Q96T25 663 aa27.67■■■□□ 2.02
GTF2F1-204ENST00000594965 DEFB129Q9H1M3 183 aa27.67■■■□□ 2.02
GTF2F1-204ENST00000594965 A0A1B0GUL7 405 aa27.66■■■□□ 2.02
GTF2F1-204ENST00000594965 ZBTB22O15209 634 aa27.66■■■□□ 2.02
GTF2F1-204ENST00000594965 HDLBPQ00341 1268 aaKnown RBP27.66■■■□□ 2.02
GTF2F1-204ENST00000594965 SPDYE2Q495Y8 402 aa27.66■■■□□ 2.02
GTF2F1-204ENST00000594965 COL13A1Q5TAT6 717 aaPredicted RBP27.66■■■□□ 2.02
GTF2F1-204ENST00000594965 CCDC102BQ68D86 513 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms