RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 IQSEC3Q9UPP2 1182 aaPredicted RBP22.59■■□□□ 1.21
SRSF1-208ENST00000584773 PITPNM2Q9BZ72 1349 aa22.59■■□□□ 1.21
SRSF1-208ENST00000584773 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
SRSF1-208ENST00000584773 C2orf69Q8N8R5 385 aa22.58■■□□□ 1.21
SRSF1-208ENST00000584773 HHIPL1Q96JK4 782 aa22.58■■□□□ 1.21
SRSF1-208ENST00000584773 HDAC9Q9UKV0 1011 aa22.58■■□□□ 1.21
SRSF1-208ENST00000584773 LRRFIP2Q9Y608 721 aaKnown RBP22.58■■□□□ 1.21
SRSF1-208ENST00000584773 AOX1Q06278 1338 aa22.58■■□□□ 1.21
SRSF1-208ENST00000584773 KIF16BQ96L93 1317 aa22.58■■□□□ 1.21
SRSF1-208ENST00000584773 PTPN12Q05209 780 aaKnown RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 MOB2Q70IA6 237 aa22.57■■□□□ 1.2
SRSF1-208ENST00000584773 TDRD7Q8NHU6 1098 aaKnown RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 ZBED3Q96IU2 234 aaPredicted RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 PDE8BO95263 885 aa22.57■■□□□ 1.2
SRSF1-208ENST00000584773 HSPA8P11142 646 aaKnown RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 LBX1P52954 281 aa22.57■■□□□ 1.2
SRSF1-208ENST00000584773 MAP2K1Q02750 393 aaPredicted RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 FRAT1Q92837 279 aaPredicted RBP22.57■■□□□ 1.2
SRSF1-208ENST00000584773 SIL1Q9H173 461 aa22.57■■□□□ 1.2
SRSF1-208ENST00000584773 TSKSQ9UJT2 592 aa22.57■■□□□ 1.2
SRSF1-208ENST00000584773 ARAP2Q8WZ64 1704 aa22.56■■□□□ 1.2
SRSF1-208ENST00000584773 TRIM27P14373 513 aa22.56■■□□□ 1.2
SRSF1-208ENST00000584773 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
SRSF1-208ENST00000584773 TNS4Q8IZW8 715 aa22.56■■□□□ 1.2
SRSF1-208ENST00000584773 ECM29Q5VYK3 1845 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 PAPPA2Q9BXP8 1791 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 FAM205AQ6ZU69 1335 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 FAM155AB1AL88 458 aaPredicted RBP22.55■■□□□ 1.2
SRSF1-208ENST00000584773 EYA2O00167 538 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 CFAP100Q494V2 611 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 RGMBQ6NW40 437 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 ATG9AQ7Z3C6 839 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 FBXO33Q7Z6M2 555 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
SRSF1-208ENST00000584773 PA2G4Q9UQ80 394 aaKnown RBP22.55■■□□□ 1.2
SRSF1-208ENST00000584773 MAP2K2P36507 400 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 BCAMP50895 628 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 FKBP1AP62942 108 aaKnown RBP22.54■■□□□ 1.2
SRSF1-208ENST00000584773 CHAF1AQ13111 956 aaPredicted RBP22.54■■□□□ 1.2
SRSF1-208ENST00000584773 DLGAP5Q15398 846 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 GRIK5Q16478 980 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 MFSD14BQ5SR56 506 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 INTS3Q68E01 1043 aaKnown RBP22.54■■□□□ 1.2
SRSF1-208ENST00000584773 CLUAP1Q96AJ1 413 aa22.54■■□□□ 1.2
SRSF1-208ENST00000584773 CLRN2A0PK11 232 aa22.53■■□□□ 1.2
SRSF1-208ENST00000584773 FGFR2P21802 821 aa22.53■■□□□ 1.2
SRSF1-208ENST00000584773 ZNF157P51786 506 aaPredicted RBP22.53■■□□□ 1.2
SRSF1-208ENST00000584773 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
SRSF1-208ENST00000584773 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
SRSF1-208ENST00000584773 PRMT6Q96LA8 375 aaPredicted RBP22.52■■□□□ 1.2
SRSF1-208ENST00000584773 SPDYE2BA6NHP3 402 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 UBE2Q2LH0YL09 131 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 SPDYE6P0CI01 402 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 MMP14P50281 582 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 PUM3Q15397 648 aaKnown RBP22.51■■□□□ 1.19
SRSF1-208ENST00000584773 MTMR14Q8NCE2 650 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 FZD1Q9UP38 647 aa22.51■■□□□ 1.19
SRSF1-208ENST00000584773 RBM5P52756 815 aaKnown RBP eCLIP22.5■■□□□ 1.195e-41■■■■□ 19.3
SRSF1-208ENST00000584773 NOGQ13253 232 aa22.5■■□□□ 1.19
SRSF1-208ENST00000584773 PRKG1Q13976 671 aa22.5■■□□□ 1.19
SRSF1-208ENST00000584773 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
SRSF1-208ENST00000584773 APOBEC3FQ8IUX4 373 aaKnown RBP22.5■■□□□ 1.19
SRSF1-208ENST00000584773 PRDM10Q9NQV6 1147 aa22.5■■□□□ 1.19
SRSF1-208ENST00000584773 TTF2Q9UNY4 1162 aaKnown RBP22.5■■□□□ 1.19
SRSF1-208ENST00000584773 MYH13Q9UKX3 1938 aa22.49■■□□□ 1.19
SRSF1-208ENST00000584773 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
SRSF1-208ENST00000584773 SLC10A3P09131 477 aa22.49■■□□□ 1.19
SRSF1-208ENST00000584773 RASAL3Q86YV0 1011 aa22.49■■□□□ 1.19
SRSF1-208ENST00000584773 BEGAINQ9BUH8 593 aa22.49■■□□□ 1.19
SRSF1-208ENST00000584773 FRAT2O75474 233 aaPredicted RBP22.48■■□□□ 1.19
SRSF1-208ENST00000584773 CAPN15O75808 1086 aa22.48■■□□□ 1.19
SRSF1-208ENST00000584773 IFIT1P09914 478 aaKnown RBP22.48■■□□□ 1.19
SRSF1-208ENST00000584773 KIF23Q02241 960 aaPredicted RBP22.48■■□□□ 1.19
SRSF1-208ENST00000584773 TTLL12Q14166 644 aaPredicted RBP22.48■■□□□ 1.19
SRSF1-208ENST00000584773 TMEM57Q8N5G2 664 aa22.48■■□□□ 1.19
SRSF1-208ENST00000584773 VEZTQ9HBM0 779 aa22.48■■□□□ 1.19
SRSF1-208ENST00000584773 COL1A1P02452 1464 aaPredicted RBP22.47■■□□□ 1.19
SRSF1-208ENST00000584773 SSC5DA1L4H1 1573 aa22.47■■□□□ 1.19
SRSF1-208ENST00000584773 SLC5A1P13866 664 aa22.47■■□□□ 1.19
SRSF1-208ENST00000584773 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
SRSF1-208ENST00000584773 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 CIAO1O76071 339 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 GNAI3P08754 354 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 FKBP1BP68106 108 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 LPIN2Q92539 896 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 CCDC102AQ96A19 550 aa22.46■■□□□ 1.19
SRSF1-208ENST00000584773 CRKP46108 304 aa22.45■■□□□ 1.18
SRSF1-208ENST00000584773 ATP2B3Q16720 1220 aa22.45■■□□□ 1.18
SRSF1-208ENST00000584773 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
SRSF1-208ENST00000584773 TDRD3Q9H7E2 651 aaKnown RBP22.45■■□□□ 1.18
SRSF1-208ENST00000584773 COPRSQ9NQ92 184 aa22.45■■□□□ 1.18
SRSF1-208ENST00000584773 SRGAP3O43295 1099 aa22.44■■□□□ 1.18
SRSF1-208ENST00000584773 NF2P35240 595 aa22.44■■□□□ 1.18
SRSF1-208ENST00000584773 CEP126Q9P2H0 1117 aa22.44■■□□□ 1.18
SRSF1-208ENST00000584773 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
SRSF1-208ENST00000584773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.44■■□□□ 1.18
SRSF1-208ENST00000584773 CASP8AP2Q9UKL3 1982 aa22.43■■□□□ 1.18
SRSF1-208ENST00000584773 MYO1BO43795 1136 aa22.43■■□□□ 1.18
SRSF1-208ENST00000584773 ADORA1P30542 326 aa22.43■■□□□ 1.18
SRSF1-208ENST00000584773 IL15P40933 162 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms