RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 MMP14P50281 582 aa17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 ZNF157P51786 506 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CAPN15O75808 1086 aa17.06■□□□□ 0.32
CDK5RAP3-233ENST00000584186 HSPA8P11142 646 aaKnown RBP17.06■□□□□ 0.32
CDK5RAP3-233ENST00000584186 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-233ENST00000584186 KIF16BQ96L93 1317 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 PDE8BO95263 885 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 NOGQ13253 232 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 TTLL12Q14166 644 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 TSKSQ9UJT2 592 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 THSD7BQ9C0I4 1608 aa17.05■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CAVIN4Q5BKX8 364 aa17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 MOB2Q70IA6 237 aa17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FRAT1Q92837 279 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 PCDHAC2Q9Y5I4 1007 aa17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-233ENST00000584186 RFX5P48382 616 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FKBP1AP62942 108 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CHAF1AQ13111 956 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 MFSD14BQ5SR56 506 aa17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 SIL1Q9H173 461 aa17.03■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FAM155AB1AL88 458 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 EYA2O00167 538 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 MYO1BO43795 1136 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 BCAR3O75815 825 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 NF2P35240 595 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FKBP1BP68106 108 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 MEIS3Q99687 375 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
CDK5RAP3-233ENST00000584186 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 BCAMP50895 628 aa17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 KIF23Q02241 960 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 PRKG1Q13976 671 aa17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SPDYE6P0CI01 402 aa17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 MTMR14Q8NCE2 650 aa17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 DEFB129Q9H1M3 183 aa17■□□□□ 0.31
CDK5RAP3-233ENST00000584186 CA12O43570 354 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SLC10A3P09131 477 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 TRIM27P14373 513 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ATG9AQ7Z3C6 839 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CDK5RAP3-233ENST00000584186 AOX1Q06278 1338 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 GNAI3P08754 354 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SLC5A1P13866 664 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 FGFR2P21802 821 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 RASAL3Q86YV0 1011 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 PA2G4Q9UQ80 394 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-233ENST00000584186 GRIK5Q16478 980 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ARMC9Q7Z3E5 817 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 LPIN2Q92539 896 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SERPINA10Q9UK55 444 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 FZD1Q9UP38 647 aa16.97■□□□□ 0.31
CDK5RAP3-233ENST00000584186 CIAO1O76071 339 aa16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 CRKP46108 304 aa16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ATP2B3Q16720 1220 aa16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-233ENST00000584186 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms