RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HSPA1BP0DMV9 641 aaKnown RBP25.46■■□□□ 1.67
SS18-224ENST00000584083 FKBP1AP62942 108 aaKnown RBP25.46■■□□□ 1.67
SS18-224ENST00000584083 GRM1Q13255 1194 aa25.46■■□□□ 1.67
SS18-224ENST00000584083 PUM3Q15397 648 aaKnown RBP25.46■■□□□ 1.67
SS18-224ENST00000584083 TMEM57Q8N5G2 664 aa25.46■■□□□ 1.67
SS18-224ENST00000584083 PITPNM2Q9BZ72 1349 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 WDR33Q9C0J8 1336 aaKnown RBP25.45■■□□□ 1.66
SS18-224ENST00000584083 WNT10BO00744 389 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 IFIT1P09914 478 aaKnown RBP25.45■■□□□ 1.66
SS18-224ENST00000584083 ECE1P42892 770 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 ATG9AQ7Z3C6 839 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 FBXO33Q7Z6M2 555 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 SAPCD2Q86UD0 394 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 FBXO3Q9UK99 471 aa25.45■■□□□ 1.66
SS18-224ENST00000584083 FAM205AQ6ZU69 1335 aa25.44■■□□□ 1.66
SS18-224ENST00000584083 FRAT2O75474 233 aaPredicted RBP25.44■■□□□ 1.66
SS18-224ENST00000584083 CIAO1O76071 339 aa25.44■■□□□ 1.66
SS18-224ENST00000584083 CYP4F22Q6NT55 531 aa25.44■■□□□ 1.66
SS18-224ENST00000584083 FTSJ3Q8IY81 847 aaKnown RBP25.44■■□□□ 1.66
SS18-224ENST00000584083 CAPNS2Q96L46 248 aa25.44■■□□□ 1.66
SS18-224ENST00000584083 IQSEC3Q9UPP2 1182 aaPredicted RBP25.44■■□□□ 1.66
SS18-224ENST00000584083 GNAI2P04899 355 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 SLC5A1P13866 664 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 DLGAP5Q15398 846 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 C2orf69Q8N8R5 385 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 CDCA5Q96FF9 252 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 CEP126Q9P2H0 1117 aa25.43■■□□□ 1.66
SS18-224ENST00000584083 SCAF8Q9UPN6 1271 aaKnown RBP25.43■■□□□ 1.66
SS18-224ENST00000584083 PA2G4Q9UQ80 394 aaKnown RBP25.43■■□□□ 1.66
SS18-224ENST00000584083 PCNTO95613 3336 aa25.42■■□□□ 1.66
SS18-224ENST00000584083 SRGAP3O43295 1099 aa25.42■■□□□ 1.66
SS18-224ENST00000584083 FGFR2P21802 821 aa25.42■■□□□ 1.66
SS18-224ENST00000584083 MFSD14BQ5SR56 506 aa25.42■■□□□ 1.66
SS18-224ENST00000584083 GBA2Q9HCG7 927 aaPredicted RBP25.42■■□□□ 1.66
SS18-224ENST00000584083 IL15P40933 162 aaPredicted RBP25.41■■□□□ 1.66
SS18-224ENST00000584083 BCAMP50895 628 aa25.41■■□□□ 1.66
SS18-224ENST00000584083 CHAF1AQ13111 956 aaPredicted RBP25.41■■□□□ 1.66
SS18-224ENST00000584083 DZIP1LQ8IYY4 767 aaKnown RBP25.41■■□□□ 1.66
SS18-224ENST00000584083 LPIN2Q92539 896 aa25.41■■□□□ 1.66
SS18-224ENST00000584083 COPRSQ9NQ92 184 aa25.41■■□□□ 1.66
SS18-224ENST00000584083 HUNKP57058 714 aa25.4■■□□□ 1.66
SS18-224ENST00000584083 HHIPL1Q96JK4 782 aa25.4■■□□□ 1.66
SS18-224ENST00000584083 RBM5P52756 815 aaKnown RBP eCLIP25.39■■□□□ 1.66
SS18-224ENST00000584083 MTX1Q13505 466 aa25.39■■□□□ 1.66
SS18-224ENST00000584083 ATP2B3Q16720 1220 aa25.39■■□□□ 1.66
SS18-224ENST00000584083 CFAP100Q494V2 611 aa25.39■■□□□ 1.66
SS18-224ENST00000584083 MYH13Q9UKX3 1938 aa25.39■■□□□ 1.65
SS18-224ENST00000584083 APOBEC3FQ8IUX4 373 aaKnown RBP25.38■■□□□ 1.65
SS18-224ENST00000584083 ITPRIPQ8IWB1 547 aa25.38■■□□□ 1.65
SS18-224ENST00000584083 MTMR14Q8NCE2 650 aa25.38■■□□□ 1.65
SS18-224ENST00000584083 ZBED3Q96IU2 234 aaPredicted RBP25.38■■□□□ 1.65
SS18-224ENST00000584083 TTF2Q9UNY4 1162 aaKnown RBP25.38■■□□□ 1.65
SS18-224ENST00000584083 ECM29Q5VYK3 1845 aa25.37■■□□□ 1.65
SS18-224ENST00000584083 PRAMEF18Q5VWM3 479 aa25.37■■□□□ 1.65
SS18-224ENST00000584083 AIDAQ96BJ3 306 aa25.37■■□□□ 1.65
SS18-224ENST00000584083 PCDHAC2Q9Y5I4 1007 aa25.37■■□□□ 1.65
SS18-224ENST00000584083 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
SS18-224ENST00000584083 MYO1BO43795 1136 aa25.36■■□□□ 1.65
SS18-224ENST00000584083 RLBP1P12271 317 aa25.36■■□□□ 1.65
SS18-224ENST00000584083 TBC1D22AQ8WUA7 517 aa25.36■■□□□ 1.65
SS18-224ENST00000584083 AOC2O75106 756 aa25.35■■□□□ 1.65
SS18-224ENST00000584083 MAP2K1Q02750 393 aaPredicted RBP25.35■■□□□ 1.65
SS18-224ENST00000584083 SPDYE2BA6NHP3 402 aa25.34■■□□□ 1.65
SS18-224ENST00000584083 SPDYE6P0CI01 402 aa25.34■■□□□ 1.65
SS18-224ENST00000584083 PRMT6Q96LA8 375 aaPredicted RBP25.34■■□□□ 1.65
SS18-224ENST00000584083 WBP1LQ9NX94 342 aa25.34■■□□□ 1.65
SS18-224ENST00000584083 PNMA6EA0A0J9YXQ4 647 aa25.33■■□□□ 1.65
SS18-224ENST00000584083 CLRN2A0PK11 232 aa25.33■■□□□ 1.65
SS18-224ENST00000584083 NF2P35240 595 aa25.33■■□□□ 1.65
SS18-224ENST00000584083 MAP2K2P36507 400 aa25.33■■□□□ 1.65
SS18-224ENST00000584083 RGMBQ6NW40 437 aa25.33■■□□□ 1.65
SS18-224ENST00000584083 FOXN1O15353 648 aa25.32■■□□□ 1.64
SS18-224ENST00000584083 TTLL12Q14166 644 aaPredicted RBP25.32■■□□□ 1.64
SS18-224ENST00000584083 GNL3LQ9NVN8 582 aaKnown RBP25.32■■□□□ 1.64
SS18-224ENST00000584083 SERPINA10Q9UK55 444 aa25.32■■□□□ 1.64
SS18-224ENST00000584083 THSD7BQ9C0I4 1608 aa25.32■■□□□ 1.64
SS18-224ENST00000584083 PAPPA2Q9BXP8 1791 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 ZNF157P51786 506 aaPredicted RBP25.31■■□□□ 1.64
SS18-224ENST00000584083 FKBP1BP68106 108 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 TFCP2Q12800 502 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 GRIK5Q16478 980 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 C1orf115Q9H7X2 142 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 VEZTQ9HBM0 779 aa25.31■■□□□ 1.64
SS18-224ENST00000584083 ZBTB7BO15156 539 aaPredicted RBP25.3■■□□□ 1.64
SS18-224ENST00000584083 CRKP46108 304 aa25.3■■□□□ 1.64
SS18-224ENST00000584083 TIMM10P62072 90 aa25.3■■□□□ 1.64
SS18-224ENST00000584083 G3BP1Q13283 466 aaKnown RBP eCLIP25.3■■□□□ 1.64
SS18-224ENST00000584083 BEGAINQ9BUH8 593 aa25.3■■□□□ 1.64
SS18-224ENST00000584083 DEFB129Q9H1M3 183 aa25.3■■□□□ 1.64
SS18-224ENST00000584083 AKAP2Q9Y2D5 859 aa25.3■■□□□ 1.64
SS18-224ENST00000584083 MS4A1P11836 297 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 ADORA1P30542 326 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 NOGQ13253 232 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 MOB2Q70IA6 237 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 WDR66Q8TBY9 1149 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 CCDC102AQ96A19 550 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 RCAN3Q9UKA8 241 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 AOX1Q06278 1338 aa25.29■■□□□ 1.64
SS18-224ENST00000584083 PHKA1P46020 1223 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms