RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
SUPT4H1-206ENST00000581204 KCNQ3O43525 872 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 AP1G2O75843 785 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 CFHP08603 1231 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 MTMR2Q13614 643 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 C20orf194Q5TEA3 1177 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 CCDC30Q5VVM6 783 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 PRPF40BQ6NWY9 871 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 SAPCD2Q86UD0 394 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 C7orf43Q8WVR3 580 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 ZFRQ96KR1 1074 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 COL4A5P29400 1685 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 MRC1P22897 1456 aa10.68□□□□□ -0.7
SUPT4H1-206ENST00000581204 FZD9O00144 591 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 RNF40O75150 1001 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 ZNF790Q6PG37 636 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 ATF7IPQ6VMQ6 1270 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 HELBQ8NG08 1087 aaPredicted RBP10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 PANK1Q8TE04 598 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 LRCH3Q96II8 777 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 BRIP1Q9BX63 1249 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 SZT2Q5T011 3432 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
SUPT4H1-206ENST00000581204 HOXB7P09629 217 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 HDGFL1Q5TGJ6 251 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 PRR5LQ6MZQ0 368 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 CCDC24Q8N4L8 307 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 HHIPL1Q96JK4 782 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
SUPT4H1-206ENST00000581204 USP17L8P0C7I0 530 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 TRIM27P14373 513 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 PDE6BP35913 854 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 STYK1Q6J9G0 422 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 MTMR14Q8NCE2 650 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 ARHGAP45Q92619 1136 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 CCDC136Q96JN2 1154 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
SUPT4H1-206ENST00000581204 SRGNP10124 158 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 SCNN1DP51172 638 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 FUT2Q10981 343 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 TBC1D9BQ66K14 1250 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 ADGRD1Q6QNK2 874 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 GPC2Q8N158 579 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 CNKSR1Q969H4 720 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 POM121Q96HA1 1249 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 C1orf115Q9H7X2 142 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
SUPT4H1-206ENST00000581204 PTPRCP08575 1304 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 DLL1O00548 723 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 SNRPA1P09661 255 aaKnown RBP10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 RLBP1P12271 317 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 OLFM4Q6UX06 510 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 ANKK1Q8NFD2 765 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 ZNF496Q96IT1 587 aaPredicted RBP10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
SUPT4H1-206ENST00000581204 HTTP42858 3142 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 EPS15P42566 896 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 Q3C1V9 767 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 CCDC93Q567U6 631 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 CHPF2Q9P2E5 772 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 DBF4Q9UBU7 674 aaPredicted RBP10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 HEG1Q9ULI3 1381 aa10.62□□□□□ -0.71
SUPT4H1-206ENST00000581204 PRAMEF22A3QJZ6 481 aa10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 CELF2O95319 508 aaKnown RBP10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 G2E3Q7L622 706 aa10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 CTU1Q7Z7A3 348 aaKnown RBP10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 TMEM57Q8N5G2 664 aa10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
SUPT4H1-206ENST00000581204 SERPINA10Q9UK55 444 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms