RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ALG1LQ6GMV1 187 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 ZNF438Q7Z4V0 828 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 GMCL1Q96IK5 515 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 TET3O43151 1660 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 KDM5AP29375 1690 aaKnown RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 MTUS2Q5JR59 1369 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 XYLBO75191 536 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 TSPY4P0CV99 314 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 TSPY10P0CW01 314 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 DBN1Q16643 649 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 SNX29Q8TEQ0 813 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 FBF1Q8TES7 1133 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 CFHR5Q9BXR6 569 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 BCL11AQ9H165 835 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 IGSF5Q9NSI5 407 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 NDFIP2Q9NV92 336 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 GMPR2Q9P2T1 348 aaKnown RBP8.25□□□□□ -1.09
SF3B3-214ENST00000572365 KCNH4Q9UQ05 1017 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 FGD6Q6ZV73 1430 aa8.25□□□□□ -1.09
SF3B3-214ENST00000572365 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 MAST1Q9Y2H9 1570 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 CPNE3O75131 537 aaKnown RBP8.24□□□□□ -1.09
SF3B3-214ENST00000572365 TNP2Q05952 138 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
SF3B3-214ENST00000572365 C19orf44Q9H6X5 657 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 PARP2Q9UGN5 583 aa8.24□□□□□ -1.09
SF3B3-214ENST00000572365 LCE2BO14633 110 aa8.23□□□□□ -1.09
SF3B3-214ENST00000572365 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
SF3B3-214ENST00000572365 ITGA6P23229 1130 aa8.23□□□□□ -1.09
SF3B3-214ENST00000572365 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
SF3B3-214ENST00000572365 MRPL58Q14197 206 aaKnown RBP8.23□□□□□ -1.09
SF3B3-214ENST00000572365 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
SF3B3-214ENST00000572365 FOXD3Q9UJU5 478 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-214ENST00000572365 BRWD3Q6RI45 1802 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 EEA1Q15075 1411 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 BNIP3LO60238 219 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 MAPTP10636 758 aaKnown RBP8.22□□□□□ -1.09
SF3B3-214ENST00000572365 DAB2P98082 770 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 LRRC59Q96AG4 307 aaKnown RBP8.22□□□□□ -1.09
SF3B3-214ENST00000572365 ZNF837Q96EG3 531 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-214ENST00000572365 ZFYVE28Q9HCC9 887 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 RRP7BPQ9NSQ0 103 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 HCN2Q9UL51 889 aa8.22□□□□□ -1.09
SF3B3-214ENST00000572365 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-214ENST00000572365 AHDC1Q5TGY3 1603 aaPredicted RBP8.21□□□□□ -1.09
SF3B3-214ENST00000572365 DCDC2BA2VCK2 349 aa8.21□□□□□ -1.1
SF3B3-214ENST00000572365 KHNYNO15037 678 aaKnown RBP8.21□□□□□ -1.1
SF3B3-214ENST00000572365 XPCQ01831 940 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-214ENST00000572365 CCINQ13939 588 aa8.21□□□□□ -1.1
SF3B3-214ENST00000572365 TMC4Q7Z404 712 aa8.21□□□□□ -1.1
SF3B3-214ENST00000572365 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
SF3B3-214ENST00000572365 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
SF3B3-214ENST00000572365 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-214ENST00000572365 CCDC141Q6ZP82 1450 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 PHACTR2O75167 634 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 RECKO95980 971 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 ITGAEP38570 1179 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 R3HDM1Q15032 1099 aaKnown RBP8.2□□□□□ -1.1
SF3B3-214ENST00000572365 CHRDQ9H2X0 955 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 EFCC1Q9HA90 598 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 RNF19AQ9NV58 838 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 ATXN7L1Q9ULK2 861 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-214ENST00000572365 MROH1Q8NDA8 1641 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 PNPLA6Q8IY17 1366 aa8.2□□□□□ -1.1
SF3B3-214ENST00000572365 NKTRP30414 1462 aaKnown RBP8.19□□□□□ -1.1
SF3B3-214ENST00000572365 CAMSAP2Q08AD1 1489 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 EFCAB6Q5THR3 1501 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 SASH3O75995 380 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 GNA15P30679 374 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 CCDC74AQ96AQ1 378 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 FRMD6Q96NE9 622 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
SF3B3-214ENST00000572365 NWD1Q149M9 1564 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 CEP350Q5VT06 3117 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 C11orf95C9JLR9 678 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-214ENST00000572365 PSMD2Q13200 908 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 GTPBP3Q969Y2 492 aaKnown RBP8.18□□□□□ -1.1
SF3B3-214ENST00000572365 FAM161BQ96MY7 647 aa8.18□□□□□ -1.1
SF3B3-214ENST00000572365 SORBS3O60504 671 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 MAP3K6O95382 1288 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
SF3B3-214ENST00000572365 SPEM2Q0P670 501 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 GRIN2CQ14957 1233 aa8.17□□□□□ -1.1
SF3B3-214ENST00000572365 LDLRAD1Q5T700 205 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms