RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 C4orf17Q53FE4 359 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 NBPF6Q5VWK0 638 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 CKAP2LQ8IYA6 745 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 NBPF4Q96M43 638 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 NEUROD4Q9HD90 331 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 NPHS2Q9NP85 383 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 TBX22Q9Y458 520 aa9.63□□□□□ -0.87
CNOT1-222ENST00000570139 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
CNOT1-222ENST00000570139 RPGRIP1LQ68CZ1 1315 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 PWP1Q13610 501 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 RASGRP4Q8TDF6 673 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 NOC4LQ9BVI4 516 aaKnown RBP9.62□□□□□ -0.87
CNOT1-222ENST00000570139 ZNF395Q9H8N7 513 aaPredicted RBP9.62□□□□□ -0.87
CNOT1-222ENST00000570139 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
CNOT1-222ENST00000570139 UGGT1Q9NYU2 1555 aa9.62□□□□□ -0.87
CNOT1-222ENST00000570139 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 POTECB2RU33 542 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 GADD45BO75293 160 aaPredicted RBP9.61□□□□□ -0.87
CNOT1-222ENST00000570139 GSTT1P30711 240 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 INPP5BP32019 993 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 SLC19A1P41440 591 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 WDR4P57081 412 aaKnown RBP9.61□□□□□ -0.87
CNOT1-222ENST00000570139 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 PMEPA1Q969W9 287 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 SEC16BQ96JE7 1060 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 BCO2Q9BYV7 579 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 PIF1Q9H611 641 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 PPP4R2Q9NY27 417 aa9.61□□□□□ -0.87
CNOT1-222ENST00000570139 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 ARID4BQ4LE39 1312 aaPredicted RBP9.6□□□□□ -0.87
CNOT1-222ENST00000570139 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
CNOT1-222ENST00000570139 NXPE4Q6UWF7 544 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 BTLAQ7Z6A9 289 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 GALNT12Q8IXK2 581 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 CMTR1Q8N1G2 835 aaKnown RBP9.6□□□□□ -0.87
CNOT1-222ENST00000570139 DCAF11Q8TEB1 546 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 HSH2DQ96JZ2 352 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 KLF16Q9BXK1 252 aaPredicted RBP9.6□□□□□ -0.87
CNOT1-222ENST00000570139 SUV39H2Q9H5I1 410 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
CNOT1-222ENST00000570139 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
CNOT1-222ENST00000570139 CLSTN1O94985 981 aa9.59□□□□□ -0.87
CNOT1-222ENST00000570139 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
CNOT1-222ENST00000570139 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
CNOT1-222ENST00000570139 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
CNOT1-222ENST00000570139 ZNF280CQ8ND82 737 aa9.59□□□□□ -0.87
CNOT1-222ENST00000570139 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
CNOT1-222ENST00000570139 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
CNOT1-222ENST00000570139 C3P01024 1663 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 ZFYVE9O95405 1425 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 NEXMIFQ5QGS0 1516 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 SSBP05455 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
CNOT1-222ENST00000570139 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
CNOT1-222ENST00000570139 ZNF662Q6ZS27 426 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 KIAA0825Q8IV33 1275 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
CNOT1-222ENST00000570139 MRFAP1L1Q96HT8 127 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 SPON2Q9BUD6 331 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 RSRP1Q9BUV0 290 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 KCNMB2Q9Y691 235 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 NLRP1Q9C000 1473 aa9.58□□□□□ -0.88
CNOT1-222ENST00000570139 CFAP65Q6ZU64 1925 aaKnown RBP9.57□□□□□ -0.88
CNOT1-222ENST00000570139 TIMP2P16035 220 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 EGFLAMQ63HQ2 1017 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 MEIOBQ8N635 442 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 ABI2Q9NYB9 513 aaPredicted RBP9.57□□□□□ -0.88
CNOT1-222ENST00000570139 TMEM63CQ9P1W3 806 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.57□□□□□ -0.88
CNOT1-222ENST00000570139 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
CNOT1-222ENST00000570139 IQGAP1P46940 1657 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 ADAMTSL3P82987 1691 aa9.57□□□□□ -0.88
CNOT1-222ENST00000570139 LCE2BO14633 110 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 RLBP1P12271 317 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 NBPF8Q3BBV2 869 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 RELL1Q8IUW5 271 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-222ENST00000570139 TSEN34Q9BSV6 310 aaKnown RBP9.56□□□□□ -0.88
CNOT1-222ENST00000570139 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 STRIP2Q9ULQ0 834 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 USP20Q9Y2K6 914 aa9.56□□□□□ -0.88
CNOT1-222ENST00000570139 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
CNOT1-222ENST00000570139 TNRQ92752 1358 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 USP47Q96K76 1375 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 SBNO2Q9Y2G9 1366 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 MYO5BQ9ULV0 1848 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 XYLBO75191 536 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 POLR3DP05423 398 aaPredicted RBP9.55□□□□□ -0.88
CNOT1-222ENST00000570139 NFX1Q12986 1120 aaKnown RBP9.55□□□□□ -0.88
CNOT1-222ENST00000570139 GRM2Q14416 872 aa9.55□□□□□ -0.88
CNOT1-222ENST00000570139 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms