RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 INTS3Q68E01 1043 aaKnown RBP25.24■■□□□ 1.63
PKD1-237ENST00000569983 VGLL2Q8N8G2 317 aa25.24■■□□□ 1.63
PKD1-237ENST00000569983 FRAT1Q92837 279 aaPredicted RBP25.24■■□□□ 1.63
PKD1-237ENST00000569983 FAM84BQ96KN1 310 aaPredicted RBP25.24■■□□□ 1.63
PKD1-237ENST00000569983 LRRFIP2Q9Y608 721 aaKnown RBP25.24■■□□□ 1.63
PKD1-237ENST00000569983 THSD7BQ9C0I4 1608 aa25.23■■□□□ 1.63
PKD1-237ENST00000569983 FOXN1O15353 648 aa25.23■■□□□ 1.63
PKD1-237ENST00000569983 VPS37DQ86XT2 251 aa25.23■■□□□ 1.63
PKD1-237ENST00000569983 TDRD7Q8NHU6 1098 aaKnown RBP25.23■■□□□ 1.63
PKD1-237ENST00000569983 MEIS3Q99687 375 aa25.23■■□□□ 1.63
PKD1-237ENST00000569983 F8W031 263 aaPredicted RBP25.22■■□□□ 1.63
PKD1-237ENST00000569983 EYA2O00167 538 aa25.22■■□□□ 1.63
PKD1-237ENST00000569983 PTPN12Q05209 780 aaKnown RBP25.22■■□□□ 1.63
PKD1-237ENST00000569983 ATF7IPQ6VMQ6 1270 aa25.22■■□□□ 1.63
PKD1-237ENST00000569983 SCAF8Q9UPN6 1271 aaKnown RBP25.22■■□□□ 1.63
PKD1-237ENST00000569983 FAM205AQ6ZU69 1335 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 AOC2O75106 756 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 TRIM27P14373 513 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 MAP2K2P36507 400 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 DLGAP5Q15398 846 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 CAVIN4Q5BKX8 364 aa25.21■■□□□ 1.63
PKD1-237ENST00000569983 PUM3Q15397 648 aaKnown RBP25.2■■□□□ 1.62
PKD1-237ENST00000569983 FBXO33Q7Z6M2 555 aa25.2■■□□□ 1.62
PKD1-237ENST00000569983 ZBED3Q96IU2 234 aaPredicted RBP25.2■■□□□ 1.62
PKD1-237ENST00000569983 ZBED9Q6R2W3 1325 aa25.19■■□□□ 1.62
PKD1-237ENST00000569983 GNAI3P08754 354 aa25.19■■□□□ 1.62
PKD1-237ENST00000569983 CTCFP49711 727 aaPredicted RBP25.19■■□□□ 1.62
PKD1-237ENST00000569983 MFSD14BQ5SR56 506 aa25.19■■□□□ 1.62
PKD1-237ENST00000569983 IFFO2Q5TF58 517 aa25.19■■□□□ 1.62
PKD1-237ENST00000569983 APOBEC3FQ8IUX4 373 aaKnown RBP25.19■■□□□ 1.62
PKD1-237ENST00000569983 IFIT1P09914 478 aaKnown RBP25.18■■□□□ 1.62
PKD1-237ENST00000569983 RGMBQ6NW40 437 aa25.18■■□□□ 1.62
PKD1-237ENST00000569983 MTMR14Q8NCE2 650 aa25.18■■□□□ 1.62
PKD1-237ENST00000569983 BEGAINQ9BUH8 593 aa25.18■■□□□ 1.62
PKD1-237ENST00000569983 SIL1Q9H173 461 aa25.18■■□□□ 1.62
PKD1-237ENST00000569983 FBXO3Q9UK99 471 aa25.18■■□□□ 1.62
PKD1-237ENST00000569983 FRAT2O75474 233 aaPredicted RBP25.17■■□□□ 1.62
PKD1-237ENST00000569983 CFAP100Q494V2 611 aa25.17■■□□□ 1.62
PKD1-237ENST00000569983 CLUAP1Q96AJ1 413 aa25.17■■□□□ 1.62
PKD1-237ENST00000569983 IQSEC3Q9UPP2 1182 aaPredicted RBP25.17■■□□□ 1.62
PKD1-237ENST00000569983 TNNQ9UQP3 1299 aa25.17■■□□□ 1.62
PKD1-237ENST00000569983 CIAO1O76071 339 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 FGFR2P21802 821 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 FKBP1BP68106 108 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 NOGQ13253 232 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 PRAMEF18Q5VWM3 479 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 ZKSCAN2Q63HK3 967 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 ATG9AQ7Z3C6 839 aa25.16■■□□□ 1.62
PKD1-237ENST00000569983 MYO1BO43795 1136 aa25.15■■□□□ 1.62
PKD1-237ENST00000569983 SLC5A1P13866 664 aa25.15■■□□□ 1.62
PKD1-237ENST00000569983 ZNF157P51786 506 aaPredicted RBP25.15■■□□□ 1.62
PKD1-237ENST00000569983 PCDHAC2Q9Y5I4 1007 aa25.15■■□□□ 1.62
PKD1-237ENST00000569983 PAPPA2Q9BXP8 1791 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 SPDYE2BA6NHP3 402 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 SPDYE6P0CI01 402 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 NF2P35240 595 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 BCAMP50895 628 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 RBM5P52756 815 aaKnown RBP eCLIP25.14■■□□□ 1.623e-8■□□□□ 9.1
PKD1-237ENST00000569983 CHAF1AQ13111 956 aaPredicted RBP25.14■■□□□ 1.62
PKD1-237ENST00000569983 LPIN2Q92539 896 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 CCDC102AQ96A19 550 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 CEP126Q9P2H0 1117 aa25.14■■□□□ 1.62
PKD1-237ENST00000569983 TTF2Q9UNY4 1162 aaKnown RBP25.14■■□□□ 1.62
PKD1-237ENST00000569983 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
PKD1-237ENST00000569983 COPRSQ9NQ92 184 aa25.13■■□□□ 1.61
PKD1-237ENST00000569983 PRDM10Q9NQV6 1147 aa25.13■■□□□ 1.61
PKD1-237ENST00000569983 PA2G4Q9UQ80 394 aaKnown RBP25.13■■□□□ 1.61
PKD1-237ENST00000569983 ARAP2Q8WZ64 1704 aa25.12■■□□□ 1.61
PKD1-237ENST00000569983 IL15P40933 162 aaPredicted RBP25.12■■□□□ 1.61
PKD1-237ENST00000569983 LBX1P52954 281 aa25.12■■□□□ 1.61
PKD1-237ENST00000569983 TBC1D22AQ8WUA7 517 aa25.12■■□□□ 1.61
PKD1-237ENST00000569983 PRMT6Q96LA8 375 aaPredicted RBP25.12■■□□□ 1.61
PKD1-237ENST00000569983 COL1A1P02452 1464 aaPredicted RBP25.11■■□□□ 1.61
PKD1-237ENST00000569983 FAM155AB1AL88 458 aaPredicted RBP25.11■■□□□ 1.61
PKD1-237ENST00000569983 SRGAP3O43295 1099 aa25.11■■□□□ 1.61
PKD1-237ENST00000569983 HSPA8P11142 646 aaKnown RBP25.11■■□□□ 1.61
PKD1-237ENST00000569983 TTLL12Q14166 644 aaPredicted RBP25.11■■□□□ 1.61
PKD1-237ENST00000569983 ATP2B3Q16720 1220 aa25.11■■□□□ 1.61
PKD1-237ENST00000569983 DEFB129Q9H1M3 183 aa25.11■■□□□ 1.61
PKD1-237ENST00000569983 SERPINA10Q9UK55 444 aa25.11■■□□□ 1.61
PKD1-237ENST00000569983 ECM29Q5VYK3 1845 aa25.11■■□□□ 1.61
PKD1-237ENST00000569983 CLRN2A0PK11 232 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 GNAI2P04899 355 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 MTX1Q13505 466 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 MOB2Q70IA6 237 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 TMEM57Q8N5G2 664 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 ZIC5Q96T25 663 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 VEZTQ9HBM0 779 aa25.1■■□□□ 1.61
PKD1-237ENST00000569983 UBE2Q2LH0YL09 131 aa25.08■■□□□ 1.61
PKD1-237ENST00000569983 CA12O43570 354 aa25.08■■□□□ 1.61
PKD1-237ENST00000569983 SLC10A3P09131 477 aa25.08■■□□□ 1.61
PKD1-237ENST00000569983 FTSJ3Q8IY81 847 aaKnown RBP25.08■■□□□ 1.61
PKD1-237ENST00000569983 PPP2R3BQ9Y5P8 575 aa25.08■■□□□ 1.61
PKD1-237ENST00000569983 AOX1Q06278 1338 aa25.08■■□□□ 1.6
PKD1-237ENST00000569983 CRKP46108 304 aa25.07■■□□□ 1.6
PKD1-237ENST00000569983 GRIK5Q16478 980 aa25.07■■□□□ 1.6
PKD1-237ENST00000569983 KIF23Q02241 960 aaPredicted RBP25.06■■□□□ 1.6
PKD1-237ENST00000569983 ARMC9Q7Z3E5 817 aa25.06■■□□□ 1.6
PKD1-237ENST00000569983 RASAL3Q86YV0 1011 aa25.06■■□□□ 1.6
PKD1-237ENST00000569983 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms