RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 BCAR3O75815 825 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 PDE8BO95263 885 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 HIBADHP31937 336 aaKnown RBP18.38■□□□□ 0.53
FANCA-220ENST00000566409 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
FANCA-220ENST00000566409 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
FANCA-220ENST00000566409 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 FBXO33Q7Z6M2 555 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 C2orf69Q8N8R5 385 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 AIDAQ96BJ3 306 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 TNNQ9UQP3 1299 aa18.38■□□□□ 0.53
FANCA-220ENST00000566409 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
FANCA-220ENST00000566409 FAM155AB1AL88 458 aaPredicted RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 F8W031 263 aaPredicted RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 FKBP1AP62942 108 aaKnown RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 HNRNPUQ00839 825 aaKnown RBP eCLIP18.37■□□□□ 0.53
FANCA-220ENST00000566409 INTS3Q68E01 1043 aaKnown RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 MEIS3Q99687 375 aa18.37■□□□□ 0.53
FANCA-220ENST00000566409 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
FANCA-220ENST00000566409 LRRFIP2Q9Y608 721 aaKnown RBP18.37■□□□□ 0.53
FANCA-220ENST00000566409 HSPA8P11142 646 aaKnown RBP18.36■□□□□ 0.53
FANCA-220ENST00000566409 LBX1P52954 281 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 AOX1Q06278 1338 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 RGMBQ6NW40 437 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 ATG9AQ7Z3C6 839 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 MTMR14Q8NCE2 650 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 KIF16BQ96L93 1317 aa18.36■□□□□ 0.53
FANCA-220ENST00000566409 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 EYA2O00167 538 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 FGFR2P21802 821 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 MOB2Q70IA6 237 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
FANCA-220ENST00000566409 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
FANCA-220ENST00000566409 TRIM27P14373 513 aa18.34■□□□□ 0.53
FANCA-220ENST00000566409 DLGAP5Q15398 846 aa18.34■□□□□ 0.53
FANCA-220ENST00000566409 GRIK5Q16478 980 aa18.34■□□□□ 0.53
FANCA-220ENST00000566409 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
FANCA-220ENST00000566409 MFSD14BQ5SR56 506 aa18.34■□□□□ 0.53
FANCA-220ENST00000566409 PRMT6Q96LA8 375 aaPredicted RBP18.34■□□□□ 0.53
FANCA-220ENST00000566409 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
FANCA-220ENST00000566409 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
FANCA-220ENST00000566409 BCAMP50895 628 aa18.33■□□□□ 0.52
FANCA-220ENST00000566409 ZNF157P51786 506 aaPredicted RBP18.33■□□□□ 0.52
FANCA-220ENST00000566409 NOGQ13253 232 aa18.33■□□□□ 0.52
FANCA-220ENST00000566409 TSKSQ9UJT2 592 aa18.32■□□□□ 0.52
FANCA-220ENST00000566409 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
FANCA-220ENST00000566409 FKBP1BP68106 108 aa18.31■□□□□ 0.52
FANCA-220ENST00000566409 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
FANCA-220ENST00000566409 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
FANCA-220ENST00000566409 APOBEC3FQ8IUX4 373 aaKnown RBP18.31■□□□□ 0.52
FANCA-220ENST00000566409 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
FANCA-220ENST00000566409 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
FANCA-220ENST00000566409 SIL1Q9H173 461 aa18.31■□□□□ 0.52
FANCA-220ENST00000566409 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
FANCA-220ENST00000566409 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 CLRN2A0PK11 232 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
FANCA-220ENST00000566409 CIAO1O76071 339 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 SLC10A3P09131 477 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 KIF23Q02241 960 aaPredicted RBP18.3■□□□□ 0.52
FANCA-220ENST00000566409 CAVIN4Q5BKX8 364 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 BEGAINQ9BUH8 593 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 DEFB129Q9H1M3 183 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
FANCA-220ENST00000566409 CASP8AP2Q9UKL3 1982 aa18.3■□□□□ 0.52
FANCA-220ENST00000566409 IFIT1P09914 478 aaKnown RBP18.29■□□□□ 0.52
FANCA-220ENST00000566409 CHAF1AQ13111 956 aaPredicted RBP18.29■□□□□ 0.52
FANCA-220ENST00000566409 RASAL3Q86YV0 1011 aa18.29■□□□□ 0.52
FANCA-220ENST00000566409 LPIN2Q92539 896 aa18.29■□□□□ 0.52
FANCA-220ENST00000566409 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
FANCA-220ENST00000566409 FBXO3Q9UK99 471 aa18.29■□□□□ 0.52
FANCA-220ENST00000566409 AKAP11Q9UKA4 1901 aa18.28■□□□□ 0.52
FANCA-220ENST00000566409 GNAI3P08754 354 aa18.28■□□□□ 0.52
FANCA-220ENST00000566409 RBM5P52756 815 aaKnown RBP eCLIP18.28■□□□□ 0.52
FANCA-220ENST00000566409 SERPINA10Q9UK55 444 aa18.28■□□□□ 0.52
FANCA-220ENST00000566409 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
FANCA-220ENST00000566409 SSC5DA1L4H1 1573 aa18.28■□□□□ 0.52
FANCA-220ENST00000566409 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
FANCA-220ENST00000566409 MTX1Q13505 466 aa18.27■□□□□ 0.52
FANCA-220ENST00000566409 PRKG1Q13976 671 aa18.27■□□□□ 0.52
FANCA-220ENST00000566409 CSRNP1Q96S65 589 aa18.27■□□□□ 0.52
FANCA-220ENST00000566409 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
FANCA-220ENST00000566409 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
FANCA-220ENST00000566409 SLC5A1P13866 664 aa18.26■□□□□ 0.51
FANCA-220ENST00000566409 IL15P40933 162 aaPredicted RBP18.26■□□□□ 0.51
FANCA-220ENST00000566409 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
FANCA-220ENST00000566409 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
FANCA-220ENST00000566409 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
FANCA-220ENST00000566409 TDRD3Q9H7E2 651 aaKnown RBP18.26■□□□□ 0.51
FANCA-220ENST00000566409 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
FANCA-220ENST00000566409 CEP126Q9P2H0 1117 aa18.26■□□□□ 0.51
FANCA-220ENST00000566409 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 CA12O43570 354 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 MYO1BO43795 1136 aa18.25■□□□□ 0.51
FANCA-220ENST00000566409 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms