RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 PTPN12Q05209 780 aaKnown RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 CCDC57Q2TAC2 916 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 DPY19L2Q6NUT2 758 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 CEP85Q6P2H3 762 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 AGBL3Q8NEM8 1001 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 BCAR3O75815 825 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 GTF2E1P29083 439 aaPredicted RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 PUM3Q15397 648 aaKnown RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 COL25A1Q9BXS0 654 aaPredicted RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 BICC1Q9H694 974 aaKnown RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 ELL2O00472 640 aaPredicted RBP6.97□□□□□ -1.29
LINC01963-201ENST00000562038 GPTP24298 496 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 C3orf67Q6ZVT6 689 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 GPC2Q8N158 579 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 MPNDQ8N594 471 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 FAM89AQ96GI7 184 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 GGA1Q9UJY5 639 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 MAST3O60307 1309 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
LINC01963-201ENST00000562038 NBPF7P0C2Y1 421 aaPredicted RBP6.97□□□□□ -1.29
LINC01963-201ENST00000562038 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
LINC01963-201ENST00000562038 ZNF280AP59817 542 aaPredicted RBP6.97□□□□□ -1.29
LINC01963-201ENST00000562038 TNIP1Q15025 636 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 ATG9AQ7Z3C6 839 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 FBXO33Q7Z6M2 555 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 TBC1D16Q8TBP0 767 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 TBC1D22AQ8WUA7 517 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 LPIN2Q92539 896 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 GREM2Q9H772 168 aa6.97□□□□□ -1.29
LINC01963-201ENST00000562038 ATP5J2-PTCD1G3V325 749 aa6.96□□□□□ -1.29
LINC01963-201ENST00000562038 ZC3H15Q8WU90 426 aaKnown RBP6.96□□□□□ -1.29
LINC01963-201ENST00000562038 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.29
LINC01963-201ENST00000562038 AK9Q5TCS8 1911 aa6.96□□□□□ -1.29
LINC01963-201ENST00000562038 PDE4DIPQ5VU43 2346 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 F6X3S4 739 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 PDE8BO95263 885 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 PIP4K2AP48426 406 aaPredicted RBP6.96□□□□□ -1.3
LINC01963-201ENST00000562038 STRIP1Q5VSL9 837 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
LINC01963-201ENST00000562038 ANP32EQ9BTT0 268 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 VIL1P09327 827 aaKnown RBP6.96□□□□□ -1.3
LINC01963-201ENST00000562038 BMP8BP34820 402 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 EPHA10Q5JZY3 1008 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 FKBP1CQ5VVH2 108 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 ZNF804AQ7Z570 1209 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 NUTM1Q86Y26 1132 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 SYNE4Q8N205 404 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 TDRD7Q8NHU6 1098 aaKnown RBP6.96□□□□□ -1.3
LINC01963-201ENST00000562038 ZBED3Q96IU2 234 aaPredicted RBP6.96□□□□□ -1.3
LINC01963-201ENST00000562038 MEIS3Q99687 375 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 DCTPP1Q9H773 170 aa6.96□□□□□ -1.3
LINC01963-201ENST00000562038 NAV1Q8NEY1 1877 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 A0A0G2JLW4 131 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 UQCRFS1P1P0C7P4 283 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 CHRNA5P30532 468 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 FOXK2Q01167 660 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 FBXO46Q6PJ61 603 aaPredicted RBP6.95□□□□□ -1.3
LINC01963-201ENST00000562038 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
LINC01963-201ENST00000562038 CELF1Q92879 486 aaKnown RBP6.95□□□□□ -1.3
LINC01963-201ENST00000562038 TTC41PQ6P2S7 1318 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 RLBP1P12271 317 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 GPSM2P81274 684 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 GMLQ99445 158 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 KCNG1Q9UIX4 513 aa6.95□□□□□ -1.3
LINC01963-201ENST00000562038 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
LINC01963-201ENST00000562038 SLC5A1P13866 664 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 HCLS1P14317 486 aaPredicted RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 CHRNDQ07001 517 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 BICDL1Q6ZP65 573 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 SMC5Q8IY18 1101 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 FAM163AQ96GL9 167 aaPredicted RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 GREB1LQ9C091 1923 aaPredicted RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 NOGQ13253 232 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 SYMPKQ92797 1274 aaKnown RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 KIF1BPQ96EK5 621 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 MPHOSPH8Q99549 860 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 ZNF330Q9Y3S2 320 aaPredicted RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
LINC01963-201ENST00000562038 NIM1KQ8IY84 436 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 FAM122AQ96E09 287 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 STAP2Q9UGK3 403 aa6.94□□□□□ -1.3
LINC01963-201ENST00000562038 NPHP1O15259 732 aa6.93□□□□□ -1.3
LINC01963-201ENST00000562038 DEKP35659 375 aaKnown RBP6.93□□□□□ -1.3
LINC01963-201ENST00000562038 IL27Q8NEV9 243 aa6.93□□□□□ -1.3
LINC01963-201ENST00000562038 ZNF622Q969S3 477 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC01963-201ENST00000562038 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
LINC01963-201ENST00000562038 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
LINC01963-201ENST00000562038 DENND2AQ9ULE3 1009 aa6.93□□□□□ -1.3
LINC01963-201ENST00000562038 BCS1LQ9Y276 419 aa6.93□□□□□ -1.3
LINC01963-201ENST00000562038 SMIM5Q71RC9 77 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms