RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KIAA1211Q6ZU35 1233 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.54□□□□□ -1.68
CHD9-204ENST00000561869 NBPF11Q86T75 865 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 CCNJLQ8IV13 435 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 DZIP1LQ8IYY4 767 aaKnown RBP4.54□□□□□ -1.68
CHD9-204ENST00000561869 KLHL23Q8NBE8 558 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 FOXD4L4Q8WXT5 416 aaPredicted RBP4.54□□□□□ -1.68
CHD9-204ENST00000561869 BSNDQ8WZ55 320 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 ALKBH8Q96BT7 664 aaKnown RBP4.54□□□□□ -1.68
CHD9-204ENST00000561869 TCF12Q99081 682 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 NIF3L1Q9GZT8 377 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 AKTIPQ9H8T0 292 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 OSGEPQ9NPF4 335 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 SEC31BQ9NQW1 1179 aa4.54□□□□□ -1.68
CHD9-204ENST00000561869 PIP4K2BP78356 416 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 KCNA1Q09470 495 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 TMC7Q7Z402 723 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 AGGF1Q8N302 714 aaeCLIP4.53□□□□□ -1.68
CHD9-204ENST00000561869 DCAF11Q8TEB1 546 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 WNT8BQ93098 351 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 DMRTB1Q96MA1 342 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 IVNS1ABPQ9Y6Y0 642 aa4.53□□□□□ -1.68
CHD9-204ENST00000561869 EIF1AYO14602 144 aaKnown RBP4.52□□□□□ -1.69
CHD9-204ENST00000561869 CPNE3O75131 537 aaKnown RBP4.52□□□□□ -1.69
CHD9-204ENST00000561869 NEFLP07196 543 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 ESRRAP11474 423 aaPredicted RBP4.52□□□□□ -1.69
CHD9-204ENST00000561869 GRIA4P48058 902 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 CABP4P57796 275 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 DSC3Q14574 896 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 SPRED3Q2MJR0 410 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 FAM117BQ6P1L5 589 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 UBASH3BQ8TF42 649 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 CCDC74AQ96AQ1 378 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 UBL7Q96S82 380 aaPredicted RBP4.52□□□□□ -1.69
CHD9-204ENST00000561869 DNAJC25Q9H1X3 360 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 DCTN4Q9UJW0 460 aa4.52□□□□□ -1.69
CHD9-204ENST00000561869 A0A096LPE4 126 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 A0A1W2PPZ6 126 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 ZNF423Q2M1K9 1284 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 PRR23CQ6ZRP0 262 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 ACAD11Q709F0 780 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 ASAP3Q8TDY4 903 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 CSRNP1Q96S65 589 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 NPHS2Q9NP85 383 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 BIN2Q9UBW5 565 aaPredicted RBP4.51□□□□□ -1.69
CHD9-204ENST00000561869 RNF112Q9ULX5 631 aa4.51□□□□□ -1.69
CHD9-204ENST00000561869 FAM177BA6PVY3 158 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 TREHO43280 583 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 DLGAP3O95886 979 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 NLRP12P59046 1061 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 C19orf57Q0VDD7 668 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 IKBKEQ14164 716 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 DUOXA2Q1HG44 320 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 GLIS3Q8NEA6 775 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 TMC1Q8TDI8 760 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 SLC7A3Q8WY07 619 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 NRSN2Q9GZP1 204 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 SOX17Q9H6I2 414 aaPredicted RBP4.5□□□□□ -1.69
CHD9-204ENST00000561869 LIN7BQ9HAP6 207 aa4.5□□□□□ -1.69
CHD9-204ENST00000561869 MEGF11A6BM72 1044 aa4.49□□□□□ -1.69
CHD9-204ENST00000561869 ITPKAP23677 461 aa4.49□□□□□ -1.69
CHD9-204ENST00000561869 PRPF40BQ6NWY9 871 aaKnown RBP4.49□□□□□ -1.69
CHD9-204ENST00000561869 ARMC10Q8N2F6 343 aa4.49□□□□□ -1.69
CHD9-204ENST00000561869 EPS8L3Q8TE67 593 aaKnown RBP4.49□□□□□ -1.69
CHD9-204ENST00000561869 FAM46AQ96IP4 442 aaKnown RBP4.49□□□□□ -1.69
CHD9-204ENST00000561869 CLEC4MQ9H2X3 399 aaPredicted RBP4.49□□□□□ -1.69
CHD9-204ENST00000561869 ABCB6Q9NP58 842 aa4.49□□□□□ -1.69
CHD9-204ENST00000561869 LOC100289279A0A1B0GTE1 492 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 GLB1P16278 677 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 FSTP19883 344 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 MAPK1P28482 360 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 ARL4DP49703 201 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 PLCB3Q01970 1234 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 PCDH1Q08174 1060 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 GRM2Q14416 872 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 ENOX2Q16206 610 aaKnown RBP4.48□□□□□ -1.69
CHD9-204ENST00000561869 PI16Q6UXB8 463 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 EHD4Q9H223 541 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 ZNF576Q9H609 170 aa4.48□□□□□ -1.69
CHD9-204ENST00000561869 TMEM238LA0A1B0GVL6 79 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 CTSBP07858 339 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 SSTR4P31391 388 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 PTPN12Q05209 780 aaKnown RBP4.47□□□□□ -1.69
CHD9-204ENST00000561869 FMR1Q06787 632 aaKnown RBP eCLIP4.47□□□□□ -1.698e-16■■■■■ 55.6
CHD9-204ENST00000561869 ASB16Q96NS5 453 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 TRIM56Q9BRZ2 755 aaKnown RBP4.47□□□□□ -1.69
CHD9-204ENST00000561869 TMPRSS13Q9BYE2 586 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 CEP41Q9BYV8 373 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 RNF208Q9H0X6 261 aa4.47□□□□□ -1.69
CHD9-204ENST00000561869 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 MED26O95402 600 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 B3GALT4O96024 378 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 PREPP48147 710 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 GSTM4Q03013 218 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 FAAP100Q0VG06 881 aa4.46□□□□□ -1.7
CHD9-204ENST00000561869 UVSSAQ2YD98 709 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms