RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 REM2Q8IYK8 340 aaPredicted RBP20.46■□□□□ 0.87
SNX1-213ENST00000561026 RNF186Q9NXI6 227 aa20.46■□□□□ 0.87
SNX1-213ENST00000561026 NF2P35240 595 aa20.45■□□□□ 0.86
SNX1-213ENST00000561026 UBE4AQ14139 1066 aa20.45■□□□□ 0.86
SNX1-213ENST00000561026 RABL6Q3YEC7 729 aaPredicted RBP20.45■□□□□ 0.86
SNX1-213ENST00000561026 MTMR14Q8NCE2 650 aa20.45■□□□□ 0.86
SNX1-213ENST00000561026 PUS3Q9BZE2 481 aaKnown RBP20.45■□□□□ 0.86
SNX1-213ENST00000561026 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
SNX1-213ENST00000561026 TRPA1O75762 1119 aa20.44■□□□□ 0.86
SNX1-213ENST00000561026 TTLL12Q14166 644 aaPredicted RBP20.44■□□□□ 0.86
SNX1-213ENST00000561026 RIPOR2Q9Y4F9 1068 aa20.44■□□□□ 0.86
SNX1-213ENST00000561026 A0A1B0GUL6 1792 aa20.44■□□□□ 0.86
SNX1-213ENST00000561026 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
SNX1-213ENST00000561026 F8W031 263 aaPredicted RBP20.43■□□□□ 0.86
SNX1-213ENST00000561026 CDCA7LQ96GN5 454 aa20.43■□□□□ 0.86
SNX1-213ENST00000561026 JAG2Q9Y219 1238 aa20.43■□□□□ 0.86
SNX1-213ENST00000561026 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
SNX1-213ENST00000561026 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
SNX1-213ENST00000561026 ANKRD44Q8N8A2 993 aa20.42■□□□□ 0.86
SNX1-213ENST00000561026 TDRD7Q8NHU6 1098 aaKnown RBP20.42■□□□□ 0.86
SNX1-213ENST00000561026 FAM84BQ96KN1 310 aaPredicted RBP20.42■□□□□ 0.86
SNX1-213ENST00000561026 USP44Q9H0E7 712 aa20.42■□□□□ 0.86
SNX1-213ENST00000561026 DEFB129Q9H1M3 183 aa20.42■□□□□ 0.86
SNX1-213ENST00000561026 FAM205AQ6ZU69 1335 aa20.42■□□□□ 0.86
SNX1-213ENST00000561026 GYG1P46976 350 aa20.41■□□□□ 0.86
SNX1-213ENST00000561026 ALDH1L2Q3SY69 923 aa20.41■□□□□ 0.86
SNX1-213ENST00000561026 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
SNX1-213ENST00000561026 MCOLN1Q9GZU1 580 aa20.41■□□□□ 0.86
SNX1-213ENST00000561026 PCDHAC2Q9Y5I4 1007 aa20.41■□□□□ 0.86
SNX1-213ENST00000561026 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
SNX1-213ENST00000561026 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
SNX1-213ENST00000561026 ARMC9Q7Z3E5 817 aa20.4■□□□□ 0.86
SNX1-213ENST00000561026 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
SNX1-213ENST00000561026 PRMT6Q96LA8 375 aaPredicted RBP20.4■□□□□ 0.86
SNX1-213ENST00000561026 CCDC85CA6NKD9 419 aa20.39■□□□□ 0.85
SNX1-213ENST00000561026 MYO1BO43795 1136 aa20.39■□□□□ 0.85
SNX1-213ENST00000561026 PTPN12Q05209 780 aaKnown RBP20.39■□□□□ 0.85
SNX1-213ENST00000561026 DGKZQ13574 1117 aa20.39■□□□□ 0.85
SNX1-213ENST00000561026 COL1A1P02452 1464 aaPredicted RBP20.38■□□□□ 0.85
SNX1-213ENST00000561026 PRKG1Q13976 671 aa20.38■□□□□ 0.85
SNX1-213ENST00000561026 LRRC24Q50LG9 513 aa20.38■□□□□ 0.85
SNX1-213ENST00000561026 MFSD14BQ5SR56 506 aa20.38■□□□□ 0.85
SNX1-213ENST00000561026 LDLRAD1Q5T700 205 aa20.38■□□□□ 0.85
SNX1-213ENST00000561026 PPP2R3BQ9Y5P8 575 aa20.38■□□□□ 0.85
SNX1-213ENST00000561026 CLRN2A0PK11 232 aa20.37■□□□□ 0.85
SNX1-213ENST00000561026 METTL24Q5JXM2 366 aa20.37■□□□□ 0.85
SNX1-213ENST00000561026 FBXO33Q7Z6M2 555 aa20.37■□□□□ 0.85
SNX1-213ENST00000561026 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
SNX1-213ENST00000561026 AKAP11Q9UKA4 1901 aa20.37■□□□□ 0.85
SNX1-213ENST00000561026 PDE8BO95263 885 aa20.36■□□□□ 0.85
SNX1-213ENST00000561026 RBM5P52756 815 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX1-213ENST00000561026 VGLL2Q8N8G2 317 aa20.36■□□□□ 0.85
SNX1-213ENST00000561026 ANGEL1Q9UNK9 670 aaKnown RBP20.36■□□□□ 0.85
SNX1-213ENST00000561026 TM4SF4P48230 202 aa20.35■□□□□ 0.85
SNX1-213ENST00000561026 VPS37DQ86XT2 251 aa20.35■□□□□ 0.85
SNX1-213ENST00000561026 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
SNX1-213ENST00000561026 SERPINA10Q9UK55 444 aa20.35■□□□□ 0.85
SNX1-213ENST00000561026 TTF2Q9UNY4 1162 aaKnown RBP20.35■□□□□ 0.85
SNX1-213ENST00000561026 AOX1Q06278 1338 aa20.35■□□□□ 0.85
SNX1-213ENST00000561026 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
SNX1-213ENST00000561026 MAP3K11Q16584 847 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 CAVIN4Q5BKX8 364 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 VEZTQ9HBM0 779 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 FZD1Q9UP38 647 aa20.34■□□□□ 0.85
SNX1-213ENST00000561026 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
SNX1-213ENST00000561026 MKRN3Q13064 507 aaKnown RBP20.34■□□□□ 0.85
SNX1-213ENST00000561026 RASA3Q14644 834 aa20.33■□□□□ 0.84
SNX1-213ENST00000561026 SPRYD7Q5W111 196 aa20.33■□□□□ 0.84
SNX1-213ENST00000561026 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.84
SNX1-213ENST00000561026 SSC5DA1L4H1 1573 aa20.32■□□□□ 0.84
SNX1-213ENST00000561026 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 RFX5P48382 616 aaPredicted RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 SREBF2Q12772 1141 aa20.32■□□□□ 0.84
SNX1-213ENST00000561026 SPDYE2Q495Y8 402 aa20.32■□□□□ 0.84
SNX1-213ENST00000561026 NBPF12Q5TAG4 269 aaPredicted RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 SLC10A4Q96EP9 437 aa20.32■□□□□ 0.84
SNX1-213ENST00000561026 ZNF70Q9UC06 446 aaPredicted RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 NOB1Q9ULX3 412 aaKnown RBP20.32■□□□□ 0.84
SNX1-213ENST00000561026 UNCXA6NJT0 531 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 EYA2O00167 538 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 TBC1D8O95759 1140 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 FGFR2P21802 821 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 BCAMP50895 628 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 PUM3Q15397 648 aaKnown RBP20.31■□□□□ 0.84
SNX1-213ENST00000561026 TBC1D22AQ8WUA7 517 aa20.31■□□□□ 0.84
SNX1-213ENST00000561026 TDRD3Q9H7E2 651 aaKnown RBP20.31■□□□□ 0.84
SNX1-213ENST00000561026 ECM29Q5VYK3 1845 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 KIF16BQ96L93 1317 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 IFIT1P09914 478 aaKnown RBP20.3■□□□□ 0.84
SNX1-213ENST00000561026 CRKP46108 304 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 RGS19P49795 217 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 CHAF1AQ13111 956 aaPredicted RBP20.3■□□□□ 0.84
SNX1-213ENST00000561026 TNFAIP1Q13829 316 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 GRIK5Q16478 980 aa20.3■□□□□ 0.84
SNX1-213ENST00000561026 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
SNX1-213ENST00000561026 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
SNX1-213ENST00000561026 HDLBPQ00341 1268 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms