RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TNNQ9UQP3 1299 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 ADGRB3O60242 1522 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 ZFYVE16Q7Z3T8 1539 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 LMTK2Q8IWU2 1503 aa7.21□□□□□ -1.26
SNRPA1-209ENST00000560307 PPLO60437 1756 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 MROH2AA6NES4 1674 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 MCM2P49736 904 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 GABPB1Q06547 395 aaPredicted RBP7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 NBPF20Q3BBV1 942 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 SH3RF1Q7Z6J0 888 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 MORC1Q86VD1 984 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 ARHGAP45Q92619 1136 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 FEZ1Q99689 392 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 DIAPH3Q9NSV4 1193 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 ANKRD36BQ8N2N9 1353 aa7.2□□□□□ -1.26
SNRPA1-209ENST00000560307 ZCCHC11Q5TAX3 1644 aaKnown RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 EFCAB6Q5THR3 1501 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 DKK1O94907 266 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 ITGA6P23229 1130 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 OCLNQ16625 522 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 ITPRIPQ8IWB1 547 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 PDCL2Q8N4E4 241 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 TSEN2Q8NCE0 465 aaKnown RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 TSPY26PQ9H489 355 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 SEPT3Q9UH03 358 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 PCDHGA11Q9Y5H2 935 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 ADGRB1O14514 1584 aa7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 CLTCQ00610 1675 aaKnown RBP7.19□□□□□ -1.26
SNRPA1-209ENST00000560307 ICMTO60725 284 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 MYCP01106 439 aaPredicted RBP7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 NR3C2P08235 984 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 MTMR3Q13615 1198 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 TAS1R3Q7RTX0 852 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 TMEM57Q8N5G2 664 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 ANKRD7Q92527 254 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 EGFL7Q9UHF1 273 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 KIF3AQ9Y496 699 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 PLCH2O75038 1416 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 ZFYVE9O95405 1425 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 CD109Q6YHK3 1445 aa7.18□□□□□ -1.26
SNRPA1-209ENST00000560307 TUBGCP6Q96RT7 1819 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 AK9Q5TCS8 1911 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 MROH1Q8NDA8 1641 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 EPB41L2O43491 1005 aaKnown RBP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 PTMAP06454 111 aaKnown RBP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 SLC20A2Q08357 652 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 CHAF1AQ13111 956 aaPredicted RBP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 INTS3Q68E01 1043 aaKnown RBP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 GPT2Q8TD30 523 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 SSH1Q8WYL5 1049 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 IL17RAQ96F46 866 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 TSEN34Q9BSV6 310 aaKnown RBP7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
SNRPA1-209ENST00000560307 CTIFO43310 598 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 C21orf2O43822 256 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 EXOSC9Q06265 439 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 NR5A1Q13285 461 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 CASC1Q6TDU7 716 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 TMEM87AQ8NBN3 555 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 INTS4Q96HW7 963 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 LNPKQ9C0E8 428 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 OGFRQ9NZT2 677 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 ZHX1Q9UKY1 873 aaPredicted RBP7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 SSH2Q76I76 1423 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 GLI2P10070 1586 aa7.16□□□□□ -1.26
SNRPA1-209ENST00000560307 KNDC1Q76NI1 1749 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 TMPOP42166 694 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 FKBP4Q02790 459 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 CUL4AQ13619 759 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 DNTTIP2Q5QJE6 756 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 CAPN12Q6ZSI9 719 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 ZSCAN29Q8IWY8 852 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 PLEKHF1Q96S99 279 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 USP26Q9BXU7 913 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 USP25Q9UHP3 1055 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 NOB1Q9ULX3 412 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 ABCC4O15439 1325 aa7.15□□□□□ -1.26
SNRPA1-209ENST00000560307 SYCE3A1L190 88 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 CCDC66A2RUB6 948 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 SLC35F4A4IF30 521 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 GOLGA6L6A8MZA4 724 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 REC8O95072 547 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms