RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 TM4SF4P48230 202 aa22.04■■□□□ 1.12
CRTC3-208ENST00000560098 PTPN12Q05209 780 aaKnown RBP22.04■■□□□ 1.12
CRTC3-208ENST00000560098 PRKG1Q13976 671 aa22.04■■□□□ 1.12
CRTC3-208ENST00000560098 SLC4A10Q6U841 1118 aa22.04■■□□□ 1.12
CRTC3-208ENST00000560098 CTU1Q7Z7A3 348 aaKnown RBP22.04■■□□□ 1.12
CRTC3-208ENST00000560098 COL1A1P02452 1464 aaPredicted RBP22.03■■□□□ 1.12
CRTC3-208ENST00000560098 PLIN1O60240 522 aa22.03■■□□□ 1.12
CRTC3-208ENST00000560098 FKBP1AP62942 108 aaKnown RBP22.03■■□□□ 1.12
CRTC3-208ENST00000560098 SRCIN1Q9C0H9 1055 aa22.03■■□□□ 1.12
CRTC3-208ENST00000560098 DEFB129Q9H1M3 183 aa22.03■■□□□ 1.12
CRTC3-208ENST00000560098 A0A1B0GUL6 1792 aa22.03■■□□□ 1.12
CRTC3-208ENST00000560098 F8W031 263 aaPredicted RBP22.02■■□□□ 1.12
CRTC3-208ENST00000560098 TBC1D8O95759 1140 aa22.02■■□□□ 1.12
CRTC3-208ENST00000560098 MKRN3Q13064 507 aaKnown RBP22.02■■□□□ 1.12
CRTC3-208ENST00000560098 LDLRAD1Q5T700 205 aa22.02■■□□□ 1.12
CRTC3-208ENST00000560098 ANGEL1Q9UNK9 670 aaKnown RBP22.02■■□□□ 1.12
CRTC3-208ENST00000560098 SREBF2Q12772 1141 aa22.01■■□□□ 1.11
CRTC3-208ENST00000560098 CFAP100Q494V2 611 aa22.01■■□□□ 1.11
CRTC3-208ENST00000560098 PCDHAC2Q9Y5I4 1007 aa22.01■■□□□ 1.11
CRTC3-208ENST00000560098 PPP2R3BQ9Y5P8 575 aa22.01■■□□□ 1.11
CRTC3-208ENST00000560098 SPDYE2BA6NHP3 402 aa22■■□□□ 1.11
CRTC3-208ENST00000560098 MYO1BO43795 1136 aa22■■□□□ 1.11
CRTC3-208ENST00000560098 SPDYE6P0CI01 402 aa22■■□□□ 1.11
CRTC3-208ENST00000560098 JAG2Q9Y219 1238 aa22■■□□□ 1.11
CRTC3-208ENST00000560098 ZNF296Q8WUU4 475 aaPredicted RBP21.99■■□□□ 1.11
CRTC3-208ENST00000560098 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
CRTC3-208ENST00000560098 PRMT6Q96LA8 375 aaPredicted RBP21.99■■□□□ 1.11
CRTC3-208ENST00000560098 FZD1Q9UP38 647 aa21.99■■□□□ 1.11
CRTC3-208ENST00000560098 CLRN2A0PK11 232 aa21.98■■□□□ 1.11
CRTC3-208ENST00000560098 UBE4AQ14139 1066 aa21.98■■□□□ 1.11
CRTC3-208ENST00000560098 SPRYD7Q5W111 196 aa21.98■■□□□ 1.11
CRTC3-208ENST00000560098 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
CRTC3-208ENST00000560098 MAP3K11Q16584 847 aa21.97■■□□□ 1.11
CRTC3-208ENST00000560098 NOM1Q5C9Z4 860 aaKnown RBP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 FAM205AQ6ZU69 1335 aa21.97■■□□□ 1.11
CRTC3-208ENST00000560098 ZNF521Q96K83 1311 aa21.97■■□□□ 1.11
CRTC3-208ENST00000560098 PPP1R12BO60237 982 aaPredicted RBP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 NBPF7P0C2Y1 421 aaPredicted RBP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 RBM5P52756 815 aaKnown RBP eCLIP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 PKN2Q16513 984 aaKnown RBP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 TDRD7Q8NHU6 1098 aaKnown RBP21.97■■□□□ 1.11
CRTC3-208ENST00000560098 VEZTQ9HBM0 779 aa21.97■■□□□ 1.11
CRTC3-208ENST00000560098 UTYO14607 1347 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 SSC5DA1L4H1 1573 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 GPR25O00155 361 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 HIBADHP31937 336 aaKnown RBP21.96■■□□□ 1.11
CRTC3-208ENST00000560098 GYG1P46976 350 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 SUPT20HL1Q3ZLR7 823 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 SLC10A4Q96EP9 437 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 CFHR5Q9BXR6 569 aa21.96■■□□□ 1.11
CRTC3-208ENST00000560098 PUS3Q9BZE2 481 aaKnown RBP21.96■■□□□ 1.11
CRTC3-208ENST00000560098 SOX10P56693 466 aa21.95■■□□□ 1.1
CRTC3-208ENST00000560098 MFSD14BQ5SR56 506 aa21.95■■□□□ 1.1
CRTC3-208ENST00000560098 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
CRTC3-208ENST00000560098 HPS5Q9UPZ3 1129 aa21.95■■□□□ 1.1
CRTC3-208ENST00000560098 RIPOR2Q9Y4F9 1068 aa21.95■■□□□ 1.1
CRTC3-208ENST00000560098 AOX1Q06278 1338 aa21.95■■□□□ 1.1
CRTC3-208ENST00000560098 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
CRTC3-208ENST00000560098 MROH5Q6ZUA9 1318 aa21.94■■□□□ 1.1
CRTC3-208ENST00000560098 ECM29Q5VYK3 1845 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 MANSC4A6NHS7 340 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 UNCXA6NJT0 531 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 TNRC18O15417 2968 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 ALDH1A1P00352 501 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 ZBTB48P10074 688 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 INHBEP58166 350 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 NBPF12Q5TAG4 269 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 MRPL50Q8N5N7 158 aaKnown RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 CLMNQ96JQ2 1002 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 SERPINA10Q9UK55 444 aa21.93■■□□□ 1.1
CRTC3-208ENST00000560098 TTF2Q9UNY4 1162 aaKnown RBP21.93■■□□□ 1.1
CRTC3-208ENST00000560098 RASA3Q14644 834 aa21.92■■□□□ 1.1
CRTC3-208ENST00000560098 RABL6Q3YEC7 729 aaPredicted RBP21.92■■□□□ 1.1
CRTC3-208ENST00000560098 WNK4Q96J92 1243 aa21.92■■□□□ 1.1
CRTC3-208ENST00000560098 FKTNO75072 461 aa21.91■■□□□ 1.1
CRTC3-208ENST00000560098 R3HDMLQ9H3Y0 253 aa21.91■■□□□ 1.1
CRTC3-208ENST00000560098 PTPRCP08575 1304 aa21.91■■□□□ 1.1
CRTC3-208ENST00000560098 IREB2P48200 963 aaKnown RBP21.9■■□□□ 1.1
CRTC3-208ENST00000560098 TNFAIP1Q13829 316 aa21.9■■□□□ 1.1
CRTC3-208ENST00000560098 SPDYE2Q495Y8 402 aa21.9■■□□□ 1.1
CRTC3-208ENST00000560098 VPS37DQ86XT2 251 aa21.9■■□□□ 1.1
CRTC3-208ENST00000560098 IFNL1Q8IU54 200 aa21.9■■□□□ 1.1
CRTC3-208ENST00000560098 ANKRD44Q8N8A2 993 aa21.9■■□□□ 1.1
CRTC3-208ENST00000560098 ZNF70Q9UC06 446 aaPredicted RBP21.9■■□□□ 1.1
CRTC3-208ENST00000560098 USP2O75604 605 aaPredicted RBP21.89■■□□□ 1.1
CRTC3-208ENST00000560098 LRRC24Q50LG9 513 aa21.89■■□□□ 1.1
CRTC3-208ENST00000560098 FBXO33Q7Z6M2 555 aa21.89■■□□□ 1.1
CRTC3-208ENST00000560098 E9PSI1 815 aa21.89■■□□□ 1.09
CRTC3-208ENST00000560098 METTL24Q5JXM2 366 aa21.89■■□□□ 1.09
CRTC3-208ENST00000560098 DZIP1LQ8IYY4 767 aaKnown RBP21.89■■□□□ 1.09
CRTC3-208ENST00000560098 TDRD3Q9H7E2 651 aaKnown RBP21.89■■□□□ 1.09
CRTC3-208ENST00000560098 CRKP46108 304 aa21.88■■□□□ 1.09
CRTC3-208ENST00000560098 CAVIN4Q5BKX8 364 aa21.88■■□□□ 1.09
CRTC3-208ENST00000560098 FBXO46Q6PJ61 603 aaPredicted RBP21.88■■□□□ 1.09
CRTC3-208ENST00000560098 ANKRD13AQ8IZ07 590 aa21.88■■□□□ 1.09
CRTC3-208ENST00000560098 SSH1Q8WYL5 1049 aa21.88■■□□□ 1.09
CRTC3-208ENST00000560098 IGF2BP3O00425 579 aaKnown RBP eCLIP21.87■■□□□ 1.09
CRTC3-208ENST00000560098 PDE8BO95263 885 aa21.87■■□□□ 1.09
CRTC3-208ENST00000560098 VGLL2Q8N8G2 317 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms