RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 CERS5Q8N5B7 392 aa22■■□□□ 1.11
SMAD3-210ENST00000559092 MTMR14Q8NCE2 650 aa22■■□□□ 1.11
SMAD3-210ENST00000559092 CDCA5Q96FF9 252 aa22■■□□□ 1.11
SMAD3-210ENST00000559092 PSME4Q14997 1843 aa21.99■■□□□ 1.11
SMAD3-210ENST00000559092 GYG1P46976 350 aa21.99■■□□□ 1.11
SMAD3-210ENST00000559092 HUNKP57058 714 aa21.99■■□□□ 1.11
SMAD3-210ENST00000559092 CAVIN4Q5BKX8 364 aa21.99■■□□□ 1.11
SMAD3-210ENST00000559092 ZBED3Q96IU2 234 aaPredicted RBP21.99■■□□□ 1.11
SMAD3-210ENST00000559092 TRIM27P14373 513 aa21.98■■□□□ 1.11
SMAD3-210ENST00000559092 FKBP1BP68106 108 aa21.98■■□□□ 1.11
SMAD3-210ENST00000559092 PUM3Q15397 648 aaKnown RBP21.98■■□□□ 1.11
SMAD3-210ENST00000559092 VPS37DQ86XT2 251 aa21.98■■□□□ 1.11
SMAD3-210ENST00000559092 MEIS3Q99687 375 aa21.98■■□□□ 1.11
SMAD3-210ENST00000559092 LRRFIP2Q9Y608 721 aaKnown RBP21.98■■□□□ 1.11
SMAD3-210ENST00000559092 ZBED9Q6R2W3 1325 aa21.98■■□□□ 1.11
SMAD3-210ENST00000559092 CIAO1O76071 339 aa21.97■■□□□ 1.11
SMAD3-210ENST00000559092 DLGAP5Q15398 846 aa21.97■■□□□ 1.11
SMAD3-210ENST00000559092 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
SMAD3-210ENST00000559092 FOXN1O15353 648 aa21.96■■□□□ 1.11
SMAD3-210ENST00000559092 IFIT1P09914 478 aaKnown RBP21.96■■□□□ 1.11
SMAD3-210ENST00000559092 FGFR2P21802 821 aa21.96■■□□□ 1.11
SMAD3-210ENST00000559092 CTCFP49711 727 aaPredicted RBP21.96■■□□□ 1.11
SMAD3-210ENST00000559092 GRM1Q13255 1194 aa21.96■■□□□ 1.11
SMAD3-210ENST00000559092 COL13A1Q5TAT6 717 aaPredicted RBP21.96■■□□□ 1.11
SMAD3-210ENST00000559092 IFFO2Q5TF58 517 aa21.96■■□□□ 1.11
SMAD3-210ENST00000559092 APOBEC3FQ8IUX4 373 aaKnown RBP21.96■■□□□ 1.11
SMAD3-210ENST00000559092 TRPM7Q96QT4 1865 aa21.96■■□□□ 1.11
SMAD3-210ENST00000559092 MFSD14BQ5SR56 506 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 ZKSCAN2Q63HK3 967 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 RGMBQ6NW40 437 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 ATG9AQ7Z3C6 839 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 LPIN2Q92539 896 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 CCDC102AQ96A19 550 aa21.95■■□□□ 1.1
SMAD3-210ENST00000559092 NOGQ13253 232 aa21.94■■□□□ 1.1
SMAD3-210ENST00000559092 TBC1D22AQ8WUA7 517 aa21.94■■□□□ 1.1
SMAD3-210ENST00000559092 BEGAINQ9BUH8 593 aa21.94■■□□□ 1.1
SMAD3-210ENST00000559092 COPRSQ9NQ92 184 aa21.94■■□□□ 1.1
SMAD3-210ENST00000559092 F8W031 263 aaPredicted RBP21.93■■□□□ 1.1
SMAD3-210ENST00000559092 MYO1BO43795 1136 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 IL15P40933 162 aaPredicted RBP21.93■■□□□ 1.1
SMAD3-210ENST00000559092 MTX1Q13505 466 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 CFAP100Q494V2 611 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 PRDM10Q9NQV6 1147 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 CEP126Q9P2H0 1117 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 JAG2Q9Y219 1238 aa21.93■■□□□ 1.1
SMAD3-210ENST00000559092 SPDYE2BA6NHP3 402 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 AOC2O75106 756 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 FRAT2O75474 233 aaPredicted RBP21.92■■□□□ 1.1
SMAD3-210ENST00000559092 SPDYE6P0CI01 402 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 SLC5A1P13866 664 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 BCAMP50895 628 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 SERPINA10Q9UK55 444 aa21.92■■□□□ 1.1
SMAD3-210ENST00000559092 GNAI2P04899 355 aa21.91■■□□□ 1.1
SMAD3-210ENST00000559092 NF2P35240 595 aa21.91■■□□□ 1.1
SMAD3-210ENST00000559092 ZNF157P51786 506 aaPredicted RBP21.91■■□□□ 1.1
SMAD3-210ENST00000559092 SIL1Q9H173 461 aa21.91■■□□□ 1.1
SMAD3-210ENST00000559092 TTF2Q9UNY4 1162 aaKnown RBP21.91■■□□□ 1.1
SMAD3-210ENST00000559092 SCAF8Q9UPN6 1271 aaKnown RBP21.91■■□□□ 1.1
SMAD3-210ENST00000559092 ZNF646O15015 1829 aaPredicted RBP21.9■■□□□ 1.1
SMAD3-210ENST00000559092 FAM155AB1AL88 458 aaPredicted RBP21.9■■□□□ 1.1
SMAD3-210ENST00000559092 CA12O43570 354 aa21.9■■□□□ 1.1
SMAD3-210ENST00000559092 CLUAP1Q96AJ1 413 aa21.9■■□□□ 1.1
SMAD3-210ENST00000559092 PRMT6Q96LA8 375 aaPredicted RBP21.9■■□□□ 1.1
SMAD3-210ENST00000559092 SUGT1Q9Y2Z0 365 aa21.9■■□□□ 1.1
SMAD3-210ENST00000559092 PPP2R3BQ9Y5P8 575 aa21.9■■□□□ 1.1
SMAD3-210ENST00000559092 A0A1B0GUL6 1792 aa21.89■■□□□ 1.1
SMAD3-210ENST00000559092 SRGAP3O43295 1099 aa21.89■■□□□ 1.09
SMAD3-210ENST00000559092 HDLBPQ00341 1268 aaKnown RBP21.89■■□□□ 1.09
SMAD3-210ENST00000559092 PRAMEF18Q5VWM3 479 aa21.89■■□□□ 1.09
SMAD3-210ENST00000559092 MRIQ9BWK5 157 aa21.89■■□□□ 1.09
SMAD3-210ENST00000559092 DEFB129Q9H1M3 183 aa21.89■■□□□ 1.09
SMAD3-210ENST00000559092 IQSEC3Q9UPP2 1182 aaPredicted RBP21.89■■□□□ 1.09
SMAD3-210ENST00000559092 RBM5P52756 815 aaKnown RBP eCLIP21.88■■□□□ 1.09
SMAD3-210ENST00000559092 PA2G4Q9UQ80 394 aaKnown RBP21.88■■□□□ 1.09
SMAD3-210ENST00000559092 TNNQ9UQP3 1299 aa21.88■■□□□ 1.09
SMAD3-210ENST00000559092 ZBTB22O15209 634 aa21.87■■□□□ 1.09
SMAD3-210ENST00000559092 HSPA8P11142 646 aaKnown RBP21.87■■□□□ 1.09
SMAD3-210ENST00000559092 CHAF1AQ13111 956 aaPredicted RBP21.87■■□□□ 1.09
SMAD3-210ENST00000559092 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
SMAD3-210ENST00000559092 TMEM57Q8N5G2 664 aa21.87■■□□□ 1.09
SMAD3-210ENST00000559092 PCDHAC2Q9Y5I4 1007 aa21.87■■□□□ 1.09
SMAD3-210ENST00000559092 COL1A1P02452 1464 aaPredicted RBP21.87■■□□□ 1.09
SMAD3-210ENST00000559092 THSD7BQ9C0I4 1608 aa21.87■■□□□ 1.09
SMAD3-210ENST00000559092 SLC10A3P09131 477 aa21.86■■□□□ 1.09
SMAD3-210ENST00000559092 LBX1P52954 281 aa21.86■■□□□ 1.09
SMAD3-210ENST00000559092 REM2Q8IYK8 340 aaPredicted RBP21.86■■□□□ 1.09
SMAD3-210ENST00000559092 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
SMAD3-210ENST00000559092 WDR66Q8TBY9 1149 aa21.86■■□□□ 1.09
SMAD3-210ENST00000559092 GNL3LQ9NVN8 582 aaKnown RBP21.86■■□□□ 1.09
SMAD3-210ENST00000559092 POLR2AP24928 1970 aaKnown RBP21.85■■□□□ 1.09
SMAD3-210ENST00000559092 UBE2Q2LH0YL09 131 aa21.85■■□□□ 1.09
SMAD3-210ENST00000559092 CRKP46108 304 aa21.85■■□□□ 1.09
SMAD3-210ENST00000559092 ARMC9Q7Z3E5 817 aa21.85■■□□□ 1.09
SMAD3-210ENST00000559092 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
SMAD3-210ENST00000559092 DZIP1LQ8IYY4 767 aaKnown RBP21.85■■□□□ 1.09
SMAD3-210ENST00000559092 CLRN2A0PK11 232 aa21.84■■□□□ 1.09
SMAD3-210ENST00000559092 TNFAIP1Q13829 316 aa21.84■■□□□ 1.09
SMAD3-210ENST00000559092 TTLL12Q14166 644 aaPredicted RBP21.84■■□□□ 1.09
SMAD3-210ENST00000559092 SUPT20HL1Q3ZLR7 823 aa21.84■■□□□ 1.09
SMAD3-210ENST00000559092 SPDYE2Q495Y8 402 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms