RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 KIAA0319Q5VV43 1072 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
GPHN-215ENST00000557654 TXNRD3Q86VQ6 643 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 ASB16Q96NS5 453 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
GPHN-215ENST00000557654 SOX1O00570 391 aaPredicted RBP9.17□□□□□ -0.94
GPHN-215ENST00000557654 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
GPHN-215ENST00000557654 MAPK8P45983 427 aa9.17□□□□□ -0.94
GPHN-215ENST00000557654 NLRP12P59046 1061 aa9.17□□□□□ -0.94
GPHN-215ENST00000557654 UBASH3BQ8TF42 649 aa9.17□□□□□ -0.94
GPHN-215ENST00000557654 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
GPHN-215ENST00000557654 A0A096LPE4 126 aa9.16□□□□□ -0.94
GPHN-215ENST00000557654 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
GPHN-215ENST00000557654 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
GPHN-215ENST00000557654 IKBKEQ14164 716 aa9.16□□□□□ -0.94
GPHN-215ENST00000557654 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
GPHN-215ENST00000557654 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
GPHN-215ENST00000557654 F8W735 103 aaPredicted RBP9.15□□□□□ -0.94
GPHN-215ENST00000557654 ESRRAP11474 423 aaPredicted RBP9.15□□□□□ -0.94
GPHN-215ENST00000557654 GRM2Q14416 872 aa9.15□□□□□ -0.94
GPHN-215ENST00000557654 ENOX2Q16206 610 aaKnown RBP9.15□□□□□ -0.94
GPHN-215ENST00000557654 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
GPHN-215ENST00000557654 MEGF10Q96KG7 1140 aa9.15□□□□□ -0.94
GPHN-215ENST00000557654 WWC3Q9ULE0 1092 aa9.15□□□□□ -0.94
GPHN-215ENST00000557654 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
GPHN-215ENST00000557654 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
GPHN-215ENST00000557654 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
GPHN-215ENST00000557654 AKTIPQ9H8T0 292 aa9.14□□□□□ -0.95
GPHN-215ENST00000557654 ABCB6Q9NP58 842 aa9.14□□□□□ -0.95
GPHN-215ENST00000557654 C19orf57Q0VDD7 668 aa9.13□□□□□ -0.95
GPHN-215ENST00000557654 SUZ12Q15022 739 aaKnown RBP9.13□□□□□ -0.95
GPHN-215ENST00000557654 DUOXA2Q1HG44 320 aa9.13□□□□□ -0.95
GPHN-215ENST00000557654 ZNF423Q2M1K9 1284 aa9.13□□□□□ -0.95
GPHN-215ENST00000557654 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.13□□□□□ -0.95
GPHN-215ENST00000557654 OSGEPQ9NPF4 335 aa9.13□□□□□ -0.95
GPHN-215ENST00000557654 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
GPHN-215ENST00000557654 PCDH1Q08174 1060 aa9.12□□□□□ -0.95
GPHN-215ENST00000557654 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
GPHN-215ENST00000557654 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
GPHN-215ENST00000557654 WNT8BQ93098 351 aa9.12□□□□□ -0.95
GPHN-215ENST00000557654 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
GPHN-215ENST00000557654 GZF1Q9H116 711 aaPredicted RBP9.12□□□□□ -0.95
GPHN-215ENST00000557654 RSPO4Q2I0M5 234 aaPredicted RBP9.11□□□□□ -0.95
GPHN-215ENST00000557654 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
GPHN-215ENST00000557654 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
GPHN-215ENST00000557654 CLEC4MQ9H2X3 399 aaPredicted RBP9.11□□□□□ -0.95
GPHN-215ENST00000557654 ZNF576Q9H609 170 aa9.11□□□□□ -0.95
GPHN-215ENST00000557654 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
GPHN-215ENST00000557654 GLB1P16278 677 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 ARL4DP49703 201 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 GSTM4Q03013 218 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 PRPF40BQ6NWY9 871 aaKnown RBP9.1□□□□□ -0.95
GPHN-215ENST00000557654 TP53INP1Q96A56 240 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 BCO2Q9BYV7 579 aa9.1□□□□□ -0.95
GPHN-215ENST00000557654 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 ANKRD33BA6NCL7 494 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 ITPKAP23677 461 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 FCGRTP55899 365 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 NXPE4Q6UWF7 544 aa9.09□□□□□ -0.95
GPHN-215ENST00000557654 DLGAP3O95886 979 aa9.08□□□□□ -0.96
GPHN-215ENST00000557654 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
GPHN-215ENST00000557654 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
GPHN-215ENST00000557654 ADAM23O75077 832 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 ITGB7P26010 798 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 Q6ZS46 218 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 UBL7Q96S82 380 aaPredicted RBP9.07□□□□□ -0.96
GPHN-215ENST00000557654 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 SOX17Q9H6I2 414 aaPredicted RBP9.07□□□□□ -0.96
GPHN-215ENST00000557654 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
GPHN-215ENST00000557654 LOC100289279A0A1B0GTE1 492 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 CTSBP07858 339 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 DZIP1LQ8IYY4 767 aaKnown RBP9.06□□□□□ -0.96
GPHN-215ENST00000557654 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 NRSN2Q9GZP1 204 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
GPHN-215ENST00000557654 DYRK3O43781 588 aa9.05□□□□□ -0.96
GPHN-215ENST00000557654 ECEL1O95672 775 aa9.05□□□□□ -0.96
GPHN-215ENST00000557654 B3GALT4O96024 378 aa9.05□□□□□ -0.96
GPHN-215ENST00000557654 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
GPHN-215ENST00000557654 DNAJC14Q6Y2X3 702 aaPredicted RBP9.05□□□□□ -0.96
GPHN-215ENST00000557654 TRIM56Q9BRZ2 755 aaKnown RBP9.05□□□□□ -0.96
GPHN-215ENST00000557654 OSBPL7Q9BZF2 842 aa9.05□□□□□ -0.96
GPHN-215ENST00000557654 ATP2B2Q01814 1243 aa9.04□□□□□ -0.96
GPHN-215ENST00000557654 MAOBP27338 520 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
GPHN-215ENST00000557654 ALG1LQ6GMV1 187 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 NPAS4Q8IUM7 802 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 FBF1Q8TES7 1133 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
GPHN-215ENST00000557654 PREPP48147 710 aa9.02□□□□□ -0.97
GPHN-215ENST00000557654 RNF208Q9H0X6 261 aa9.02□□□□□ -0.97
GPHN-215ENST00000557654 POU4F3Q15319 338 aa9.01□□□□□ -0.97
GPHN-215ENST00000557654 CCDC27Q2M243 656 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms