RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 LAMB1P07942 1786 aa12.97□□□□□ -0.33
APEX1-218ENST00000557344 IL16Q14005 1332 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 H0YGN5 161 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 GTF2IP78347 998 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 DLGAP5Q15398 846 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 NBPF11Q86T75 865 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 GREM2Q9H772 168 aa12.96□□□□□ -0.33
APEX1-218ENST00000557344 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
APEX1-218ENST00000557344 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
APEX1-218ENST00000557344 KLRK1P26718 216 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
APEX1-218ENST00000557344 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
APEX1-218ENST00000557344 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 SLC4A8Q2Y0W8 1093 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 NBPF12Q5TAG4 269 aaPredicted RBP12.94□□□□□ -0.34
APEX1-218ENST00000557344 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 CERS5Q8N5B7 392 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
APEX1-218ENST00000557344 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 DDX58O95786 925 aaKnown RBP12.93□□□□□ -0.34
APEX1-218ENST00000557344 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 ANKRD2Q9GZV1 360 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 CD209Q9NNX6 404 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 CEP290O15078 2479 aa12.93□□□□□ -0.34
APEX1-218ENST00000557344 FANCIQ9NVI1 1328 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 MYO1BO43795 1136 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
APEX1-218ENST00000557344 CCDC30Q5VVM6 783 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 OPTNQ96CV9 577 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
APEX1-218ENST00000557344 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
APEX1-218ENST00000557344 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
APEX1-218ENST00000557344 AOX1Q06278 1338 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 RASA3Q14644 834 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 TWISTNBQ3B726 338 aaPredicted RBP12.91□□□□□ -0.34
APEX1-218ENST00000557344 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 BRI3BPQ8WY22 251 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 ELP3Q9H9T3 547 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
APEX1-218ENST00000557344 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
APEX1-218ENST00000557344 SPEF2Q9C093 1822 aa12.9□□□□□ -0.34
APEX1-218ENST00000557344 DLL1O00548 723 aa12.9□□□□□ -0.34
APEX1-218ENST00000557344 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
APEX1-218ENST00000557344 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
APEX1-218ENST00000557344 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
APEX1-218ENST00000557344 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.34
APEX1-218ENST00000557344 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
APEX1-218ENST00000557344 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
APEX1-218ENST00000557344 SZT2Q5T011 3432 aa12.9□□□□□ -0.35
APEX1-218ENST00000557344 IRS2Q9Y4H2 1338 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
APEX1-218ENST00000557344 H7C1W4 665 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 ITGA6P23229 1130 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 KCNJ4P48050 445 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 FKBP1AP62942 108 aaKnown RBP12.89□□□□□ -0.35
APEX1-218ENST00000557344 CHRNDQ07001 517 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.89□□□□□ -0.35
APEX1-218ENST00000557344 C15orf52Q6ZUT6 534 aaKnown RBP12.89□□□□□ -0.35
APEX1-218ENST00000557344 G2E3Q7L622 706 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 SH3TC2Q8TF17 1288 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
APEX1-218ENST00000557344 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 MYH3P11055 1940 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 CCL15-CCL14A0A0B4J2E2 113 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 SNAP23O00161 211 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 IL1R1P14778 569 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 GTF2A2P52657 109 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 CCL15Q16663 113 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
APEX1-218ENST00000557344 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 SLC17A8Q8NDX2 589 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 PLA2G12BQ9BX93 195 aa12.88□□□□□ -0.35
APEX1-218ENST00000557344 VAMP4O75379 141 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 CSF1RP07333 972 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
APEX1-218ENST00000557344 EXOSC9Q06265 439 aaKnown RBP12.87□□□□□ -0.35
APEX1-218ENST00000557344 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 DPF3Q92784 378 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
APEX1-218ENST00000557344 TLR2O60603 784 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms