RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 DDX58O95786 925 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 CWF19L2Q2TBE0 894 aaKnown RBP20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 NBPF12Q5TAG4 269 aaPredicted RBP20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 CERS5Q8N5B7 392 aa20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 ARMC5Q96C12 935 aa20.29■□□□□ 0.84
SDR39U1-217ENST00000556249 PI4KAP2A4QPH2 592 aa20.28■□□□□ 0.84
SDR39U1-217ENST00000556249 MYCP01106 439 aaPredicted RBP20.28■□□□□ 0.84
SDR39U1-217ENST00000556249 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-217ENST00000556249 PI4KAP1Q8N8J0 262 aa20.28■□□□□ 0.84
SDR39U1-217ENST00000556249 SP3Q02447 781 aa20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 PRMT6Q96LA8 375 aaPredicted RBP20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 VEZTQ9HBM0 779 aa20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 CD209Q9NNX6 404 aa20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
SDR39U1-217ENST00000556249 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 ITGA6P23229 1130 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 KCNJ4P48050 445 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 MMP14P50281 582 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 TMEM106CQ9BVX2 250 aa20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
SDR39U1-217ENST00000556249 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 TSPYL6Q8N831 410 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 MPHOSPH8Q99549 860 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
SDR39U1-217ENST00000556249 COL1A1P02452 1464 aaPredicted RBP20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 MYH3P11055 1940 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 TAF5LO75529 589 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 CHRNDQ07001 517 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 SUPT20HL1Q3ZLR7 823 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 CCDC30Q5VVM6 783 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 ZNF333Q96JL9 665 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 ELP3Q9H9T3 547 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
SDR39U1-217ENST00000556249 IREB2P48200 963 aaKnown RBP20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 GNAI1P63096 354 aa20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 WWC1Q8IX03 1113 aa20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 MTMR14Q8NCE2 650 aa20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
SDR39U1-217ENST00000556249 SPDYE2BA6NHP3 402 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 H7C1W4 665 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 MYO1BO43795 1136 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 SPDYE6P0CI01 402 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 RBM5P52756 815 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■■□□ 16.6
SDR39U1-217ENST00000556249 NEXNQ0ZGT2 675 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 RASA3Q14644 834 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 SLC4A8Q2Y0W8 1093 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 PPP2R3BQ9Y5P8 575 aa20.22■□□□□ 0.83
SDR39U1-217ENST00000556249 TESPA1A2RU30 521 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 H0YGN5 161 aa20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 SLC9C1Q4G0N8 1177 aa20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 G2E3Q7L622 706 aa20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 WDR63Q8IWG1 891 aa20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 CDAN1Q8IWY9 1227 aa20.21■□□□□ 0.83
SDR39U1-217ENST00000556249 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
SDR39U1-217ENST00000556249 MS4A4AQ96JQ5 239 aa20.2■□□□□ 0.82
SDR39U1-217ENST00000556249 LAMB1P07942 1786 aa20.2■□□□□ 0.82
SDR39U1-217ENST00000556249 IRS2Q9Y4H2 1338 aa20.2■□□□□ 0.82
SDR39U1-217ENST00000556249 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-217ENST00000556249 BRI3BPQ8WY22 251 aa20.19■□□□□ 0.82
SDR39U1-217ENST00000556249 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 TAF1CQ15572 869 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 NBPF11Q86T75 865 aa20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 SH3TC2Q8TF17 1288 aa20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 OTUD5Q96G74 571 aa20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 ECM29Q5VYK3 1845 aa20.18■□□□□ 0.82
SDR39U1-217ENST00000556249 CSF1RP07333 972 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 CASP7P55210 303 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 GCKRQ14397 625 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 ARHGAP39Q9C0H5 1083 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 IL16Q14005 1332 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 SZT2Q5T011 3432 aa20.17■□□□□ 0.82
SDR39U1-217ENST00000556249 OTOFQ9HC10 1997 aa20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 CCL15-CCL14A0A0B4J2E2 113 aa20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 IL1R1P14778 569 aa20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 CCL15Q16663 113 aa20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 TDRD3Q9H7E2 651 aaKnown RBP20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 ZFYVE28Q9HCC9 887 aa20.16■□□□□ 0.82
SDR39U1-217ENST00000556249 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
SDR39U1-217ENST00000556249 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
SDR39U1-217ENST00000556249 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
SDR39U1-217ENST00000556249 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
SDR39U1-217ENST00000556249 ZSWIM8A7E2V4 1837 aa20.15■□□□□ 0.82
SDR39U1-217ENST00000556249 E9PSI1 815 aa20.14■□□□□ 0.81
SDR39U1-217ENST00000556249 PLIN1O60240 522 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms