RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 TXNRD3Q86VQ6 643 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 MYO3BQ8WXR4 1341 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 ARHGAP45Q92619 1136 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 CDC5LQ99459 802 aaKnown RBP14.28□□□□□ -0.12
TMEM116-218ENST00000552839 SRCIN1Q9C0H9 1055 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
TMEM116-218ENST00000552839 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
TMEM116-218ENST00000552839 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
TMEM116-218ENST00000552839 DZIP1LQ8IYY4 767 aaKnown RBP14.27□□□□□ -0.13
TMEM116-218ENST00000552839 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.13
TMEM116-218ENST00000552839 COA1Q9GZY4 146 aa14.27□□□□□ -0.13
TMEM116-218ENST00000552839 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
TMEM116-218ENST00000552839 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.13
TMEM116-218ENST00000552839 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.13
TMEM116-218ENST00000552839 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 ALDH1A1P00352 501 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 TRIM27P14373 513 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
TMEM116-218ENST00000552839 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 OTOP1Q7RTM1 612 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 APOBEC3FQ8IUX4 373 aaKnown RBP14.26□□□□□ -0.13
TMEM116-218ENST00000552839 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 GREM2Q9H772 168 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 C9orf78Q9NZ63 289 aaPredicted RBP14.26□□□□□ -0.13
TMEM116-218ENST00000552839 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
TMEM116-218ENST00000552839 PLIN1O60240 522 aa14.25□□□□□ -0.13
TMEM116-218ENST00000552839 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
TMEM116-218ENST00000552839 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
TMEM116-218ENST00000552839 KIAA0825Q8IV33 1275 aa14.25□□□□□ -0.13
TMEM116-218ENST00000552839 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
TMEM116-218ENST00000552839 ZBED3Q96IU2 234 aaPredicted RBP14.25□□□□□ -0.13
TMEM116-218ENST00000552839 MANSC4A6NHS7 340 aaPredicted RBP14.24□□□□□ -0.13
TMEM116-218ENST00000552839 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 NEFLP07196 543 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 KLRK1P26718 216 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 MMP14P50281 582 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 INHBEP58166 350 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
TMEM116-218ENST00000552839 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
TMEM116-218ENST00000552839 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
TMEM116-218ENST00000552839 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
TMEM116-218ENST00000552839 KIAA0100Q14667 2235 aaKnown RBP14.23□□□□□ -0.13
TMEM116-218ENST00000552839 NEURL1BA8MQ27 555 aa14.23□□□□□ -0.13
TMEM116-218ENST00000552839 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
TMEM116-218ENST00000552839 GTF2IP78347 998 aa14.23□□□□□ -0.13
TMEM116-218ENST00000552839 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
TMEM116-218ENST00000552839 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
TMEM116-218ENST00000552839 DEFB129Q9H1M3 183 aa14.23□□□□□ -0.13
TMEM116-218ENST00000552839 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
TMEM116-218ENST00000552839 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 WNK4Q96J92 1243 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 CLMNQ96JQ2 1002 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 HDAC5Q9UQL6 1122 aa14.22□□□□□ -0.13
TMEM116-218ENST00000552839 COL1A1P02452 1464 aaPredicted RBP14.22□□□□□ -0.13
TMEM116-218ENST00000552839 ZBTB48P10074 688 aaPredicted RBP14.21□□□□□ -0.13
TMEM116-218ENST00000552839 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.13
TMEM116-218ENST00000552839 UBE3BQ7Z3V4 1068 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 TMEM57Q8N5G2 664 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 CD99L2Q8TCZ2 262 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 PCDHAC2Q9Y5I4 1007 aa14.21□□□□□ -0.13
TMEM116-218ENST00000552839 MKI67P46013 3256 aaKnown RBP14.2□□□□□ -0.14
TMEM116-218ENST00000552839 PPP1R12BO60237 982 aaPredicted RBP14.2□□□□□ -0.14
TMEM116-218ENST00000552839 UBTFL1P0CB47 393 aaPredicted RBP14.2□□□□□ -0.14
TMEM116-218ENST00000552839 GCKRQ14397 625 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 PDE3AQ14432 1141 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 DLGAP5Q15398 846 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 ERO1AQ96HE7 468 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 CD209Q9NNX6 404 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 TNNQ9UQP3 1299 aa14.2□□□□□ -0.14
TMEM116-218ENST00000552839 H7C1W4 665 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 GRM8O00222 908 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 GNAI3P08754 354 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 EN2P19622 333 aaPredicted RBP14.19□□□□□ -0.14
TMEM116-218ENST00000552839 ITGA6P23229 1130 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 GJA5P36382 358 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 CAP1Q01518 475 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 MTMR14Q8NCE2 650 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 ANKRD2Q9GZV1 360 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 DDX19BQ9UMR2 479 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 CHMP3Q9Y3E7 222 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 OTOFQ9HC10 1997 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
TMEM116-218ENST00000552839 SNAP23O00161 211 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 CHRNDQ07001 517 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 CRHR2Q13324 411 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 NBPF12Q5TAG4 269 aaPredicted RBP14.18□□□□□ -0.14
TMEM116-218ENST00000552839 ARMC5Q96C12 935 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 MPHOSPH8Q99549 860 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
TMEM116-218ENST00000552839 IRS2Q9Y4H2 1338 aa14.17□□□□□ -0.14
TMEM116-218ENST00000552839 HTTP42858 3142 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms