RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TRPA1O75762 1119 aa16.9■□□□□ 0.3
NUP188-211ENST00000550219 PRKG1Q13976 671 aa16.9■□□□□ 0.3
NUP188-211ENST00000550219 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
NUP188-211ENST00000550219 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
NUP188-211ENST00000550219 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.3
NUP188-211ENST00000550219 MKRN3Q13064 507 aaKnown RBP16.89■□□□□ 0.29
NUP188-211ENST00000550219 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
NUP188-211ENST00000550219 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
NUP188-211ENST00000550219 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
NUP188-211ENST00000550219 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
NUP188-211ENST00000550219 CSRNP1Q96S65 589 aa16.88■□□□□ 0.29
NUP188-211ENST00000550219 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
NUP188-211ENST00000550219 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
NUP188-211ENST00000550219 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
NUP188-211ENST00000550219 C15orf52Q6ZUT6 534 aaKnown RBP16.87■□□□□ 0.29
NUP188-211ENST00000550219 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 CLRN2A0PK11 232 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 IL1R1P14778 569 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 MMP14P50281 582 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 CFAP100Q494V2 611 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
NUP188-211ENST00000550219 ZBED3Q96IU2 234 aaPredicted RBP16.86■□□□□ 0.29
NUP188-211ENST00000550219 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
NUP188-211ENST00000550219 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
NUP188-211ENST00000550219 FZD1Q9UP38 647 aa16.86■□□□□ 0.29
NUP188-211ENST00000550219 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
NUP188-211ENST00000550219 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
NUP188-211ENST00000550219 GYG1P46976 350 aa16.85■□□□□ 0.29
NUP188-211ENST00000550219 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
NUP188-211ENST00000550219 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
NUP188-211ENST00000550219 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
NUP188-211ENST00000550219 VEZTQ9HBM0 779 aa16.85■□□□□ 0.29
NUP188-211ENST00000550219 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
NUP188-211ENST00000550219 MYO1BO43795 1136 aa16.84■□□□□ 0.29
NUP188-211ENST00000550219 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
NUP188-211ENST00000550219 SSC5DA1L4H1 1573 aa16.83■□□□□ 0.28
NUP188-211ENST00000550219 PTPRCP08575 1304 aa16.83■□□□□ 0.28
NUP188-211ENST00000550219 RARSP54136 660 aaKnown RBP16.83■□□□□ 0.28
NUP188-211ENST00000550219 PTPN12Q05209 780 aaKnown RBP16.83■□□□□ 0.28
NUP188-211ENST00000550219 AOX1Q06278 1338 aa16.83■□□□□ 0.28
NUP188-211ENST00000550219 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
NUP188-211ENST00000550219 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
NUP188-211ENST00000550219 DEFB129Q9H1M3 183 aa16.83■□□□□ 0.28
NUP188-211ENST00000550219 UTYO14607 1347 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
NUP188-211ENST00000550219 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
NUP188-211ENST00000550219 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
NUP188-211ENST00000550219 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 HIBADHP31937 336 aaKnown RBP16.81■□□□□ 0.28
NUP188-211ENST00000550219 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
NUP188-211ENST00000550219 LRRC24Q50LG9 513 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 VPS37DQ86XT2 251 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 ANKRD44Q8N8A2 993 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 PRMT6Q96LA8 375 aaPredicted RBP16.81■□□□□ 0.28
NUP188-211ENST00000550219 RCAN3Q9UKA8 241 aa16.81■□□□□ 0.28
NUP188-211ENST00000550219 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
NUP188-211ENST00000550219 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
NUP188-211ENST00000550219 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
NUP188-211ENST00000550219 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
NUP188-211ENST00000550219 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
NUP188-211ENST00000550219 KLHDC4Q8TBB5 520 aa16.8■□□□□ 0.28
NUP188-211ENST00000550219 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
NUP188-211ENST00000550219 SMC4Q9NTJ3 1288 aa16.8■□□□□ 0.28
NUP188-211ENST00000550219 RIPOR2Q9Y4F9 1068 aa16.8■□□□□ 0.28
NUP188-211ENST00000550219 PPP2R3BQ9Y5P8 575 aa16.8■□□□□ 0.28
NUP188-211ENST00000550219 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
NUP188-211ENST00000550219 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
NUP188-211ENST00000550219 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
NUP188-211ENST00000550219 NBPF12Q5TAG4 269 aaPredicted RBP16.78■□□□□ 0.28
NUP188-211ENST00000550219 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
NUP188-211ENST00000550219 CLMNQ96JQ2 1002 aa16.78■□□□□ 0.28
NUP188-211ENST00000550219 PPP1R12BO60237 982 aaPredicted RBP16.77■□□□□ 0.28
NUP188-211ENST00000550219 RASA3Q14644 834 aa16.77■□□□□ 0.28
NUP188-211ENST00000550219 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.28
NUP188-211ENST00000550219 LDLRAD1Q5T700 205 aa16.77■□□□□ 0.28
NUP188-211ENST00000550219 SPRYD7Q5W111 196 aa16.77■□□□□ 0.28
NUP188-211ENST00000550219 ZNF296Q8WUU4 475 aaPredicted RBP16.77■□□□□ 0.28
NUP188-211ENST00000550219 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
NUP188-211ENST00000550219 BCAR3O75815 825 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 SOX10P56693 466 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 GRIK5Q16478 980 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 SLC10A4Q96EP9 437 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 USP44Q9H0E7 712 aa16.76■□□□□ 0.27
NUP188-211ENST00000550219 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
NUP188-211ENST00000550219 TCP10L2B9ZVM9 353 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 PDE8BO95263 885 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 CRKP46108 304 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 TM4SF4P48230 202 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
NUP188-211ENST00000550219 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms