RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NEFMP07197 916 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 CCL5P13501 91 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 KLRK1P26718 216 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 CTGFP29279 349 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 GTF2IP78347 998 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 TRIM28Q13263 835 aaKnown RBP20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 COA1Q9GZY4 146 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 MINPP1Q9UNW1 487 aa20.14■□□□□ 0.81
CLSTN3-216ENST00000545663 LAMA2P24043 3122 aaKnown RBP20.13■□□□□ 0.81
CLSTN3-216ENST00000545663 GJB1P08034 283 aa20.13■□□□□ 0.81
CLSTN3-216ENST00000545663 NKX2-3Q8TAU0 364 aa20.13■□□□□ 0.81
CLSTN3-216ENST00000545663 MTMR10Q9NXD2 777 aa20.13■□□□□ 0.81
CLSTN3-216ENST00000545663 PPP2R3BQ9Y5P8 575 aa20.13■□□□□ 0.81
CLSTN3-216ENST00000545663 ZNF804BA4D1E1 1349 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 EVI5O60447 810 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 MMP14P50281 582 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 CCT4P50991 539 aaKnown RBP20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 KIF22Q14807 665 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 RNF208Q9H0X6 261 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 VEZTQ9HBM0 779 aa20.12■□□□□ 0.81
CLSTN3-216ENST00000545663 TLR2O60603 784 aa20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 FARP2O94887 1054 aaPredicted RBP20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 CERS5Q8N5B7 392 aa20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 PRMT6Q96LA8 375 aaPredicted RBP20.11■□□□□ 0.81
CLSTN3-216ENST00000545663 RASA3Q14644 834 aa20.1■□□□□ 0.81
CLSTN3-216ENST00000545663 CDAN1Q8IWY9 1227 aa20.1■□□□□ 0.81
CLSTN3-216ENST00000545663 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
CLSTN3-216ENST00000545663 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 PDE8AO60658 829 aa20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 GRK4P32298 578 aa20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 GTF2A2P52657 109 aa20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 GPR153Q6NV75 609 aa20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 U2AF1L4Q8WU68 220 aaKnown RBP20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 RIPOR2Q9Y4F9 1068 aa20.09■□□□□ 0.81
CLSTN3-216ENST00000545663 PRUNE2Q8WUY3 3088 aa20.08■□□□□ 0.81
CLSTN3-216ENST00000545663 PRMT2P55345 433 aa20.08■□□□□ 0.81
CLSTN3-216ENST00000545663 CFAP100Q494V2 611 aa20.08■□□□□ 0.81
CLSTN3-216ENST00000545663 MTMR14Q8NCE2 650 aa20.08■□□□□ 0.81
CLSTN3-216ENST00000545663 SRRDQ9UH36 339 aa20.08■□□□□ 0.81
CLSTN3-216ENST00000545663 OTOFQ9HC10 1997 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 GNRH1P01148 92 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 PSMC4P43686 418 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 VGLL4Q14135 290 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 GDF15Q99988 308 aa20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 BIN2Q9UBW5 565 aaPredicted RBP20.07■□□□□ 0.8
CLSTN3-216ENST00000545663 BTBD19C9JJ37 291 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 OSBPP22059 807 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 RAET1EQ8TD07 263 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 MYD88Q99836 296 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 UNC93B1Q9H1C4 597 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 PRDM6Q9NQX0 595 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 BSDC1Q9NW68 430 aaPredicted RBP20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 BABAM1Q9NWV8 329 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 CPA4Q9UI42 421 aa20.06■□□□□ 0.8
CLSTN3-216ENST00000545663 PCCAP05165 728 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-216ENST00000545663 BCAMP50895 628 aa20.05■□□□□ 0.8
CLSTN3-216ENST00000545663 RIPK4P57078 832 aa20.05■□□□□ 0.8
CLSTN3-216ENST00000545663 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
CLSTN3-216ENST00000545663 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
CLSTN3-216ENST00000545663 MYO1BO43795 1136 aa20.04■□□□□ 0.8
CLSTN3-216ENST00000545663 HSP90B1P14625 803 aaKnown RBP20.04■□□□□ 0.8
CLSTN3-216ENST00000545663 C17orf99Q6UX52 265 aa20.04■□□□□ 0.8
CLSTN3-216ENST00000545663 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
CLSTN3-216ENST00000545663 GREM2Q9H772 168 aa20.04■□□□□ 0.8
CLSTN3-216ENST00000545663 FMNL1O95466 1100 aaPredicted RBP20.03■□□□□ 0.8
CLSTN3-216ENST00000545663 SGPL1O95470 568 aa20.03■□□□□ 0.8
CLSTN3-216ENST00000545663 BMP8BP34820 402 aa20.03■□□□□ 0.8
CLSTN3-216ENST00000545663 MAP3K9P80192 1104 aa20.03■□□□□ 0.8
CLSTN3-216ENST00000545663 ZMYND8Q9ULU4 1186 aaPredicted RBP20.03■□□□□ 0.8
CLSTN3-216ENST00000545663 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 TEPSINQ96N21 525 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 CD209Q9NNX6 404 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 JAG2Q9Y219 1238 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 LEMD3Q9Y2U8 911 aa20.02■□□□□ 0.8
CLSTN3-216ENST00000545663 MYPNQ86TC9 1320 aa20.02■□□□□ 0.79
CLSTN3-216ENST00000545663 SNAP23O00161 211 aa20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 CETPP11597 493 aa20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 RBM5P52756 815 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 CTSWP56202 376 aa20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 LRIT3Q3SXY7 679 aa20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 TTLL11Q8NHH1 800 aa20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 LAS1LQ9Y4W2 734 aaKnown RBP20.01■□□□□ 0.79
CLSTN3-216ENST00000545663 CHL1O00533 1208 aa20■□□□□ 0.79
CLSTN3-216ENST00000545663 TFRCP02786 760 aaKnown RBP20■□□□□ 0.79
CLSTN3-216ENST00000545663 PRKCZQ05513 592 aa20■□□□□ 0.79
CLSTN3-216ENST00000545663 CCDC191Q8NCU4 936 aa20■□□□□ 0.79
CLSTN3-216ENST00000545663 PAWRQ96IZ0 340 aaKnown RBP20■□□□□ 0.79
CLSTN3-216ENST00000545663 PHAXQ9H814 394 aaKnown RBP20■□□□□ 0.79
CLSTN3-216ENST00000545663 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
CLSTN3-216ENST00000545663 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 HOXD10P28358 340 aa19.99■□□□□ 0.79
CLSTN3-216ENST00000545663 UBXN2AP68543 259 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms