RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 TRIM11Q96F44 468 aa9.49□□□□□ -0.89
COPA-206ENST00000545266 LACRTQ9GZZ8 138 aa9.49□□□□□ -0.89
COPA-206ENST00000545266 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
COPA-206ENST00000545266 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
COPA-206ENST00000545266 PPME1Q9Y570 386 aa9.49□□□□□ -0.89
COPA-206ENST00000545266 USP31Q70CQ4 1352 aa9.49□□□□□ -0.89
COPA-206ENST00000545266 EPHA1P21709 976 aa9.48□□□□□ -0.89
COPA-206ENST00000545266 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
COPA-206ENST00000545266 ST13P50502 369 aaKnown RBP9.48□□□□□ -0.89
COPA-206ENST00000545266 FCGRTP55899 365 aa9.48□□□□□ -0.89
COPA-206ENST00000545266 WFDC8Q8IUA0 241 aa9.48□□□□□ -0.89
COPA-206ENST00000545266 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
COPA-206ENST00000545266 CLEC4MQ9H2X3 399 aaPredicted RBP9.48□□□□□ -0.89
COPA-206ENST00000545266 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
COPA-206ENST00000545266 GNB5O14775 395 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 RECKO95980 971 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 B3GALT4O96024 378 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 DTHD1Q6ZMT9 781 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 SOX17Q9H6I2 414 aaPredicted RBP9.47□□□□□ -0.89
COPA-206ENST00000545266 VTI1BQ9UEU0 232 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 MKL2Q9ULH7 1088 aa9.47□□□□□ -0.89
COPA-206ENST00000545266 H3BRJ5 948 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 PIK3R2O00459 728 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
COPA-206ENST00000545266 ZNF423Q2M1K9 1284 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
COPA-206ENST00000545266 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
COPA-206ENST00000545266 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
COPA-206ENST00000545266 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
COPA-206ENST00000545266 BEND7Q8N7W2 519 aaPredicted RBP9.45□□□□□ -0.9
COPA-206ENST00000545266 IGSF5Q9NSI5 407 aa9.45□□□□□ -0.9
COPA-206ENST00000545266 CABP4P57796 275 aa9.44□□□□□ -0.9
COPA-206ENST00000545266 SETDB1Q15047 1291 aa9.44□□□□□ -0.9
COPA-206ENST00000545266 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
COPA-206ENST00000545266 DMRTC2Q8IXT2 367 aaPredicted RBP9.44□□□□□ -0.9
COPA-206ENST00000545266 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
COPA-206ENST00000545266 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
COPA-206ENST00000545266 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
COPA-206ENST00000545266 E9PSI1 815 aa9.43□□□□□ -0.9
COPA-206ENST00000545266 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
COPA-206ENST00000545266 EIF4EBP3O60516 100 aaPredicted RBP9.43□□□□□ -0.9
COPA-206ENST00000545266 DEAF1O75398 565 aaPredicted RBP9.43□□□□□ -0.9
COPA-206ENST00000545266 IKBKEQ14164 716 aa9.43□□□□□ -0.9
COPA-206ENST00000545266 PLVAPQ9BX97 442 aa9.43□□□□□ -0.9
COPA-206ENST00000545266 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 FAM177BA6PVY3 158 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 FSCN2O14926 492 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 MEI1Q5TIA1 1274 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 SV2BQ7L1I2 683 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
COPA-206ENST00000545266 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
COPA-206ENST00000545266 CEP44Q9C0F1 390 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 AKAP2Q9Y2D5 859 aa9.42□□□□□ -0.9
COPA-206ENST00000545266 FMR1NBQ8N0W7 255 aaPredicted RBP9.41□□□□□ -0.9
COPA-206ENST00000545266 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
COPA-206ENST00000545266 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
COPA-206ENST00000545266 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
COPA-206ENST00000545266 METTL5Q9NRN9 209 aaKnown RBP9.41□□□□□ -0.9
COPA-206ENST00000545266 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
COPA-206ENST00000545266 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
COPA-206ENST00000545266 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
COPA-206ENST00000545266 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
COPA-206ENST00000545266 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
COPA-206ENST00000545266 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
COPA-206ENST00000545266 DLL1O00548 723 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 ENC1O14682 589 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 SCAMP3O14828 347 aaKnown RBP9.39□□□□□ -0.91
COPA-206ENST00000545266 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 TSNAXIP1Q2TAA8 658 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 GALNT11Q8NCW6 608 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 DCAF11Q8TEB1 546 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
COPA-206ENST00000545266 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
COPA-206ENST00000545266 RAC1P63000 192 aa9.38□□□□□ -0.91
COPA-206ENST00000545266 FANCCQ00597 558 aa9.38□□□□□ -0.91
COPA-206ENST00000545266 TXNDC11Q6PKC3 985 aa9.38□□□□□ -0.91
COPA-206ENST00000545266 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
COPA-206ENST00000545266 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
COPA-206ENST00000545266 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 KLHDC7BQ96G42 594 aa9.37□□□□□ -0.91
COPA-206ENST00000545266 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 TTF2Q9UNY4 1162 aaKnown RBP9.37□□□□□ -0.91
COPA-206ENST00000545266 ELNP15502 786 aa9.36□□□□□ -0.91
COPA-206ENST00000545266 COL8A1P27658 744 aa9.36□□□□□ -0.91
COPA-206ENST00000545266 ARL4DP49703 201 aa9.36□□□□□ -0.91
COPA-206ENST00000545266 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
COPA-206ENST00000545266 ERMP1Q7Z2K6 904 aa9.36□□□□□ -0.91
COPA-206ENST00000545266 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
COPA-206ENST00000545266 CDC25BP30305 580 aa9.35□□□□□ -0.91
COPA-206ENST00000545266 CD68P34810 354 aaPredicted RBP9.35□□□□□ -0.91
COPA-206ENST00000545266 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
COPA-206ENST00000545266 AP3B2Q13367 1082 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms