RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 POLR2AP24928 1970 aaKnown RBP9.36□□□□□ -0.91
LDHA-223ENST00000545215 H7C1D1 291 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 HOXA2O43364 376 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 ALDH1B1P30837 517 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 GCGRP47871 477 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 CC2D2BQ6DHV5 1058 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 A0A1W2PP64 1363 aa9.35□□□□□ -0.91
LDHA-223ENST00000545215 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 SHTN1A0MZ66 631 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 NPHP1O15259 732 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 CYP19A1P11511 503 aaPredicted RBP9.34□□□□□ -0.91
LDHA-223ENST00000545215 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 DNAJC10Q8IXB1 793 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 GLMNQ92990 594 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 CDCA5Q96FF9 252 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
LDHA-223ENST00000545215 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 ZNRF3Q9ULT6 936 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 RAB3GAP2Q9H2M9 1393 aa9.34□□□□□ -0.91
LDHA-223ENST00000545215 GJA8P48165 433 aa9.33□□□□□ -0.92
LDHA-223ENST00000545215 KCTD17Q8N5Z5 321 aa9.33□□□□□ -0.92
LDHA-223ENST00000545215 RETREG2Q8NC44 543 aa9.33□□□□□ -0.92
LDHA-223ENST00000545215 BDP1A6H8Y1 2624 aa9.33□□□□□ -0.92
LDHA-223ENST00000545215 EDC4Q6P2E9 1401 aaKnown RBP9.33□□□□□ -0.92
LDHA-223ENST00000545215 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
LDHA-223ENST00000545215 FDX1P10109 184 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
LDHA-223ENST00000545215 CABP4P57796 275 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 SP3Q02447 781 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 IRF5Q13568 498 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 HSP90AB2PQ58FF8 381 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 SETDB2Q96T68 719 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 VPS33BQ9H267 617 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 ZBTB1Q9Y2K1 713 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 NCAPD2Q15021 1401 aa9.32□□□□□ -0.92
LDHA-223ENST00000545215 UBE2Q2LH0YL09 131 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 INHBEP58166 350 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 TNIP1Q15025 636 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 RRS1Q15050 365 aaKnown RBP9.31□□□□□ -0.92
LDHA-223ENST00000545215 MOB2Q70IA6 237 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 COG3Q96JB2 828 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 ZNF646O15015 1829 aaPredicted RBP9.31□□□□□ -0.92
LDHA-223ENST00000545215 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 PPIP5K2O43314 1243 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 GPR37L1O60883 481 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 EGFRP00533 1210 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
LDHA-223ENST00000545215 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 MTFR1Q15390 333 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 UHRF1Q96T88 793 aaPredicted RBP9.31□□□□□ -0.92
LDHA-223ENST00000545215 KIAA1468Q9P260 1216 aa9.31□□□□□ -0.92
LDHA-223ENST00000545215 A0A087WZG4 1122 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 FARP2O94887 1054 aaPredicted RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 GJB1P08034 283 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 EIF5P55010 431 aaKnown RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 AOC3Q16853 763 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 TBC1D10BQ4KMP7 808 aaPredicted RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 ATXN2LQ8WWM7 1075 aaKnown RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 MYLIPQ8WY64 445 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 DPF2Q92785 391 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 ZBED2Q9BTP6 218 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 UBE2OQ9C0C9 1292 aaKnown RBP9.3□□□□□ -0.92
LDHA-223ENST00000545215 SEMA6BQ9H3T3 888 aa9.3□□□□□ -0.92
LDHA-223ENST00000545215 COL2A1P02458 1487 aaPredicted RBP9.29□□□□□ -0.92
LDHA-223ENST00000545215 RAD17O75943 681 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
LDHA-223ENST00000545215 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 TMEM31Q5JXX7 168 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 HLA-CQ95604 372 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 ASB2Q96Q27 587 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
LDHA-223ENST00000545215 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
LDHA-223ENST00000545215 PRAMEF22A3QJZ6 481 aa9.28□□□□□ -0.92
LDHA-223ENST00000545215 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
LDHA-223ENST00000545215 CRHR2Q13324 411 aa9.28□□□□□ -0.92
LDHA-223ENST00000545215 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
LDHA-223ENST00000545215 ZMYND8Q9ULU4 1186 aaPredicted RBP9.28□□□□□ -0.92
LDHA-223ENST00000545215 CACNA1GO43497 2377 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 MANSC4A6NHS7 340 aaPredicted RBP9.27□□□□□ -0.93
LDHA-223ENST00000545215 IGF2BP3O00425 579 aaKnown RBP eCLIP9.27□□□□□ -0.932e-7■■■■■ 37.3
LDHA-223ENST00000545215 SNPHO15079 494 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 FOSL2P15408 326 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
LDHA-223ENST00000545215 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 IGSF5Q9NSI5 407 aa9.27□□□□□ -0.93
LDHA-223ENST00000545215 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms