RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
DDX55-212ENST00000544738 GREM2Q9H772 168 aa20.6■□□□□ 0.89
DDX55-212ENST00000544738 A0A0C4DFX4 3053 aa20.59■□□□□ 0.89
DDX55-212ENST00000544738 CLMNQ96JQ2 1002 aa20.59■□□□□ 0.89
DDX55-212ENST00000544738 MYH3P11055 1940 aa20.59■□□□□ 0.89
DDX55-212ENST00000544738 CRHR2Q13324 411 aa20.58■□□□□ 0.89
DDX55-212ENST00000544738 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.89
DDX55-212ENST00000544738 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
DDX55-212ENST00000544738 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
DDX55-212ENST00000544738 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 H0YGN5 161 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 ZBTB48P10074 688 aaPredicted RBP20.57■□□□□ 0.88
DDX55-212ENST00000544738 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
DDX55-212ENST00000544738 CASP7P55210 303 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 SP3Q02447 781 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 KIAA0825Q8IV33 1275 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 MINPP1Q9UNW1 487 aa20.57■□□□□ 0.88
DDX55-212ENST00000544738 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
DDX55-212ENST00000544738 PPP1R12BO60237 982 aaPredicted RBP20.56■□□□□ 0.88
DDX55-212ENST00000544738 MYCP01106 439 aaPredicted RBP20.56■□□□□ 0.88
DDX55-212ENST00000544738 CSF1RP07333 972 aa20.56■□□□□ 0.88
DDX55-212ENST00000544738 TTLL5Q6EMB2 1281 aa20.56■□□□□ 0.88
DDX55-212ENST00000544738 DLL1O00548 723 aa20.55■□□□□ 0.88
DDX55-212ENST00000544738 ITGA6P23229 1130 aa20.55■□□□□ 0.88
DDX55-212ENST00000544738 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
DDX55-212ENST00000544738 NBPF11Q86T75 865 aa20.55■□□□□ 0.88
DDX55-212ENST00000544738 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
DDX55-212ENST00000544738 F6X3S4 739 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 MMP14P50281 582 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
DDX55-212ENST00000544738 CAP1Q01518 475 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 ZNF333Q96JL9 665 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 MPHOSPH8Q99549 860 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 MED23Q9ULK4 1368 aa20.54■□□□□ 0.88
DDX55-212ENST00000544738 MAP3K11Q16584 847 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 SLC9C1Q4G0N8 1177 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 TXNRD3Q86VQ6 643 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 OTUD5Q96G74 571 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 LEMD3Q9Y2U8 911 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 PSME4Q14997 1843 aa20.53■□□□□ 0.88
DDX55-212ENST00000544738 GTF2IP78347 998 aa20.52■□□□□ 0.88
DDX55-212ENST00000544738 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
DDX55-212ENST00000544738 CHRDL2Q6WN34 429 aa20.52■□□□□ 0.88
DDX55-212ENST00000544738 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
DDX55-212ENST00000544738 PTPN18Q99952 460 aa20.52■□□□□ 0.88
DDX55-212ENST00000544738 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
DDX55-212ENST00000544738 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
DDX55-212ENST00000544738 GJA5P36382 358 aa20.51■□□□□ 0.87
DDX55-212ENST00000544738 ZBED3Q96IU2 234 aaPredicted RBP20.51■□□□□ 0.87
DDX55-212ENST00000544738 PTCH2Q9Y6C5 1203 aa20.51■□□□□ 0.87
DDX55-212ENST00000544738 E9PSI1 815 aa20.5■□□□□ 0.87
DDX55-212ENST00000544738 IFIT5Q13325 482 aaKnown RBP20.5■□□□□ 0.87
DDX55-212ENST00000544738 ARHGEF6Q15052 776 aa20.5■□□□□ 0.87
DDX55-212ENST00000544738 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
DDX55-212ENST00000544738 RANBP2P49792 3224 aaKnown RBP20.5■□□□□ 0.87
DDX55-212ENST00000544738 GRM8O00222 908 aa20.49■□□□□ 0.87
DDX55-212ENST00000544738 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
DDX55-212ENST00000544738 FOXO4P98177 505 aa20.49■□□□□ 0.87
DDX55-212ENST00000544738 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
DDX55-212ENST00000544738 C9orf78Q9NZ63 289 aaPredicted RBP20.49■□□□□ 0.87
DDX55-212ENST00000544738 CLRN2A0PK11 232 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
DDX55-212ENST00000544738 SLC4A10Q6U841 1118 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 DPF3Q92784 378 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 ZNF804BA4D1E1 1349 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
DDX55-212ENST00000544738 UNCXA6NJT0 531 aa20.47■□□□□ 0.87
DDX55-212ENST00000544738 USP2O75604 605 aaPredicted RBP20.47■□□□□ 0.87
DDX55-212ENST00000544738 KLRK1P26718 216 aa20.47■□□□□ 0.87
DDX55-212ENST00000544738 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
DDX55-212ENST00000544738 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
DDX55-212ENST00000544738 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
DDX55-212ENST00000544738 PPP2R3BQ9Y5P8 575 aa20.47■□□□□ 0.87
DDX55-212ENST00000544738 RBBP6Q7Z6E9 1792 aaKnown RBP20.46■□□□□ 0.87
DDX55-212ENST00000544738 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
DDX55-212ENST00000544738 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
DDX55-212ENST00000544738 KCNJ4P48050 445 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 CHRNDQ07001 517 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 CCDC57Q2TAC2 916 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 ANKRD13AQ8IZ07 590 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 ELP3Q9H9T3 547 aa20.46■□□□□ 0.87
DDX55-212ENST00000544738 MYO1BO43795 1136 aa20.45■□□□□ 0.86
DDX55-212ENST00000544738 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
DDX55-212ENST00000544738 OPTNQ96CV9 577 aa20.45■□□□□ 0.86
DDX55-212ENST00000544738 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
DDX55-212ENST00000544738 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
DDX55-212ENST00000544738 SSC5DA1L4H1 1573 aa20.44■□□□□ 0.86
DDX55-212ENST00000544738 TAF1CQ15572 869 aaPredicted RBP20.44■□□□□ 0.86
DDX55-212ENST00000544738 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
DDX55-212ENST00000544738 PTPRCP08575 1304 aa20.44■□□□□ 0.86
DDX55-212ENST00000544738 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
DDX55-212ENST00000544738 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
DDX55-212ENST00000544738 TAF7LQ5H9L4 462 aa20.43■□□□□ 0.86
DDX55-212ENST00000544738 PRMT6Q96LA8 375 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms