RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 TMC4Q7Z404 712 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
LEMD3-205ENST00000544506 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
LEMD3-205ENST00000544506 COL8A1P27658 744 aa9.07□□□□□ -0.96
LEMD3-205ENST00000544506 DTHD1Q6ZMT9 781 aa9.07□□□□□ -0.96
LEMD3-205ENST00000544506 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
LEMD3-205ENST00000544506 FAM8A1Q9UBU6 413 aa9.07□□□□□ -0.96
LEMD3-205ENST00000544506 AK5Q9Y6K8 562 aa9.07□□□□□ -0.96
LEMD3-205ENST00000544506 RNF225M0QZC1 329 aaPredicted RBP9.06□□□□□ -0.96
LEMD3-205ENST00000544506 DEAF1O75398 565 aaPredicted RBP9.06□□□□□ -0.96
LEMD3-205ENST00000544506 USP17L7P0C7H9 530 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 GSTT1P30711 240 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 RAC1P63000 192 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
LEMD3-205ENST00000544506 SETDB1Q15047 1291 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
LEMD3-205ENST00000544506 DTWD1Q8N5C7 304 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 C3orf58Q8NDZ4 430 aa9.06□□□□□ -0.96
LEMD3-205ENST00000544506 CLEC4MQ9H2X3 399 aaPredicted RBP9.06□□□□□ -0.96
LEMD3-205ENST00000544506 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
LEMD3-205ENST00000544506 PCDH1Q08174 1060 aa9.05□□□□□ -0.96
LEMD3-205ENST00000544506 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
LEMD3-205ENST00000544506 IKBKEQ14164 716 aa9.05□□□□□ -0.96
LEMD3-205ENST00000544506 FAM117BQ6P1L5 589 aa9.05□□□□□ -0.96
LEMD3-205ENST00000544506 CARD10Q9BWT7 1032 aa9.05□□□□□ -0.96
LEMD3-205ENST00000544506 FSCN2O14926 492 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 ESRRAP11474 423 aaPredicted RBP9.04□□□□□ -0.96
LEMD3-205ENST00000544506 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 HGSNATQ68CP4 663 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 SRA1Q9HD15 236 aaKnown RBP9.04□□□□□ -0.96
LEMD3-205ENST00000544506 MRS2Q9HD23 443 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
LEMD3-205ENST00000544506 SOX1O00570 391 aaPredicted RBP9.03□□□□□ -0.96
LEMD3-205ENST00000544506 SORBS3O60504 671 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 FBXO11Q86XK2 927 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 MAP4K3Q8IVH8 894 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 GALNT11Q8NCW6 608 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 WNT8BQ93098 351 aa9.03□□□□□ -0.96
LEMD3-205ENST00000544506 TM4SF5O14894 197 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 FAAP100Q0VG06 881 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 ZNF423Q2M1K9 1284 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 RPS26P11Q5JNZ5 115 aaPredicted RBP9.02□□□□□ -0.97
LEMD3-205ENST00000544506 SEC31BQ9NQW1 1179 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 VTI1BQ9UEU0 232 aa9.02□□□□□ -0.97
LEMD3-205ENST00000544506 B3GALT4O96024 378 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 CTSHP09668 335 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 ELNP15502 786 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 MRPL58Q14197 206 aaKnown RBP9.01□□□□□ -0.97
LEMD3-205ENST00000544506 KLHL23Q8NBE8 558 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 ZFYVE1Q9HBF4 777 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
LEMD3-205ENST00000544506 DLL1O00548 723 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 ARL4DP49703 201 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 GRIK4Q16099 956 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
LEMD3-205ENST00000544506 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
LEMD3-205ENST00000544506 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 BCL11AQ9H165 835 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
LEMD3-205ENST00000544506 GPN3Q9UHW5 284 aaPredicted RBP9□□□□□ -0.97
LEMD3-205ENST00000544506 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
LEMD3-205ENST00000544506 UNCXA6NJT0 531 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 FBXO24O75426 580 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 GSK3AP49840 483 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
LEMD3-205ENST00000544506 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 ALYREFQ86V81 257 aaKnown RBP8.99□□□□□ -0.97
LEMD3-205ENST00000544506 ZNF428Q96B54 188 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 CRELD1Q96HD1 420 aa8.99□□□□□ -0.97
LEMD3-205ENST00000544506 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
LEMD3-205ENST00000544506 ADAM11O75078 769 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
LEMD3-205ENST00000544506 ITGAEP38570 1179 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 GSTM4Q03013 218 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
LEMD3-205ENST00000544506 MEI1Q5TIA1 1274 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 DCAF11Q8TEB1 546 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 KCNK4Q9NYG8 393 aa8.98□□□□□ -0.97
LEMD3-205ENST00000544506 DDX3YO15523 660 aaKnown RBP8.97□□□□□ -0.97
LEMD3-205ENST00000544506 NLRP12P59046 1061 aa8.97□□□□□ -0.97
LEMD3-205ENST00000544506 RASSF7Q02833 373 aa8.97□□□□□ -0.97
LEMD3-205ENST00000544506 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
LEMD3-205ENST00000544506 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
LEMD3-205ENST00000544506 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
LEMD3-205ENST00000544506 SELPP16109 830 aa8.96□□□□□ -0.98
LEMD3-205ENST00000544506 NECAB3Q96P71 396 aaPredicted RBP8.96□□□□□ -0.98
LEMD3-205ENST00000544506 TRIM56Q9BRZ2 755 aaKnown RBP8.96□□□□□ -0.98
LEMD3-205ENST00000544506 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
LEMD3-205ENST00000544506 KRBA1A5PL33 1030 aa8.95□□□□□ -0.98
LEMD3-205ENST00000544506 WISP1O95388 367 aa8.95□□□□□ -0.98
LEMD3-205ENST00000544506 APBA3O96018 575 aa8.95□□□□□ -0.98
LEMD3-205ENST00000544506 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
LEMD3-205ENST00000544506 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms