RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 AK7Q96M32 723 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 IBTKQ9P2D0 1353 aaPredicted RBP9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 DDX60Q8IY21 1712 aaKnown RBP9.55□□□□□ -0.88
AC005840.3-201ENST00000541888 ZNF827Q17R98 1081 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 C8orf34Q49A92 452 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 SLC51AQ86UW1 340 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 GPCPD1Q9NPB8 672 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 CNTNAP4Q9C0A0 1308 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 MAP4K4O95819 1239 aaPredicted RBP9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 ZNF34Q8IZ26 560 aa9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 PUS3Q9BZE2 481 aaKnown RBP9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 RTCBQ9Y3I0 505 aaKnown RBP9.54□□□□□ -0.88
AC005840.3-201ENST00000541888 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 SASH1O94885 1247 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 GSPT1P15170 499 aaKnown RBP9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 CLCN1P35523 988 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 DEFB132Q7Z7B7 95 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 LRRCC1Q9C099 1032 aa9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 TLR7Q9NYK1 1049 aaKnown RBP9.53□□□□□ -0.88
AC005840.3-201ENST00000541888 IRS4O14654 1257 aaPredicted RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 ADH1BP00325 375 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 RFX5P48382 616 aaPredicted RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 PTPN12Q05209 780 aaKnown RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 EZH2Q15910 746 aaKnown RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 LRRC24Q50LG9 513 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 REPIN1Q9BWE0 567 aaKnown RBP9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 GREM2Q9H772 168 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 SLC27A5Q9Y2P5 690 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 LAMB2P55268 1798 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 ERVV-1B6SEH8 477 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 RNF223E7ERA6 249 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 RFC4P35249 363 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 MTX1Q13505 466 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
AC005840.3-201ENST00000541888 ABCC12Q96J65 1359 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 AK9Q5TCS8 1911 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 NTSR2O95665 410 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 S1PR4O95977 384 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 TFCP2Q12800 502 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 RABL6Q3YEC7 729 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 SPSB2Q99619 263 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 PDGFDQ9GZP0 370 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 CCDC8Q9H0W5 538 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
AC005840.3-201ENST00000541888 SNAP23O00161 211 aa9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 USP42Q9H9J4 1324 aaKnown RBP9.5□□□□□ -0.89
AC005840.3-201ENST00000541888 PPEF1O14829 653 aaPredicted RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 KDM4AO75164 1064 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 ITGA6P23229 1130 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 ANP32AP39687 249 aaKnown RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 CTSWP56202 376 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 EAF2Q96CJ1 260 aaPredicted RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 UTP14AQ9BVJ6 771 aaKnown RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 MX1P20591 662 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 PDE1AP54750 535 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 ATG9AQ7Z3C6 839 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 AACSQ86V21 672 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 COL24A1Q17RW2 1714 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 SALL3Q9BXA9 1300 aa9.49□□□□□ -0.89
AC005840.3-201ENST00000541888 NPHP1O15259 732 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 NFIXQ14938 502 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 AMHR2Q16671 573 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 TTC22Q5TAA0 569 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 NBPF5PQ86XG9 351 aaPredicted RBP9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 COL23A1Q86Y22 540 aaPredicted RBP9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 KIF1BPQ96EK5 621 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 ZNF652Q9Y2D9 606 aa9.48□□□□□ -0.89
AC005840.3-201ENST00000541888 PDE8AO60658 829 aa9.47□□□□□ -0.89
AC005840.3-201ENST00000541888 GYS1P13807 737 aa9.47□□□□□ -0.89
AC005840.3-201ENST00000541888 SDSP20132 328 aa9.47□□□□□ -0.89
AC005840.3-201ENST00000541888 TIMM10P62072 90 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms