RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 TMEM102Q8N9M5 508 aaPredicted RBP8.55□□□□□ -1.04
MRE11-209ENST00000540013 KRTAP9-2Q9BYQ4 174 aa8.55□□□□□ -1.04
MRE11-209ENST00000540013 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
MRE11-209ENST00000540013 ABCC8Q09428 1581 aa8.55□□□□□ -1.04
MRE11-209ENST00000540013 DNMBPQ6XZF7 1577 aa8.55□□□□□ -1.04
MRE11-209ENST00000540013 PDE2AO00408 941 aaPredicted RBP8.54□□□□□ -1.04
MRE11-209ENST00000540013 NID1P14543 1247 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 ATP11AP98196 1134 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 ZNF326Q5BKZ1 582 aaKnown RBP8.54□□□□□ -1.04
MRE11-209ENST00000540013 KIAA0319Q5VV43 1072 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
MRE11-209ENST00000540013 DTWD1Q8N5C7 304 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
MRE11-209ENST00000540013 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
MRE11-209ENST00000540013 IFT140Q96RY7 1462 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 POLR3DP05423 398 aaPredicted RBP8.53□□□□□ -1.04
MRE11-209ENST00000540013 ITGAEP38570 1179 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 CABP4P57796 275 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 RAC1P63000 192 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
MRE11-209ENST00000540013 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 CERS3Q8IU89 383 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
MRE11-209ENST00000540013 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
MRE11-209ENST00000540013 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
MRE11-209ENST00000540013 GADD45BO75293 160 aaPredicted RBP8.52□□□□□ -1.05
MRE11-209ENST00000540013 GRIK5Q16478 980 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
MRE11-209ENST00000540013 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 NPAS4Q8IUM7 802 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 IL22RA1Q8N6P7 574 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 FRMD6Q96NE9 622 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 PLVAPQ9BX97 442 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 ADAM19Q9H013 955 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 EHD4Q9H223 541 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 PPP1R1BQ9UD71 204 aaPredicted RBP8.52□□□□□ -1.05
MRE11-209ENST00000540013 TRIM33Q9UPN9 1127 aa8.52□□□□□ -1.05
MRE11-209ENST00000540013 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 A0A1W2PP55 124 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 NFKBIEO00221 500 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 GIPC1O14908 333 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 LDHBP07195 334 aaKnown RBP8.51□□□□□ -1.05
MRE11-209ENST00000540013 P4HBP07237 508 aaKnown RBP8.51□□□□□ -1.05
MRE11-209ENST00000540013 CDC27P30260 824 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
MRE11-209ENST00000540013 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
MRE11-209ENST00000540013 NXPE3Q969Y0 559 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 POP1Q99575 1024 aaKnown RBP8.51□□□□□ -1.05
MRE11-209ENST00000540013 SUV39H2Q9H5I1 410 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 LIN7BQ9HAP6 207 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 ZFYVE1Q9HBF4 777 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 SPG7Q9UQ90 795 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 PPME1Q9Y570 386 aa8.51□□□□□ -1.05
MRE11-209ENST00000540013 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
MRE11-209ENST00000540013 PRPF40AO75400 957 aaKnown RBP8.5□□□□□ -1.05
MRE11-209ENST00000540013 CCNJLQ8IV13 435 aa8.5□□□□□ -1.05
MRE11-209ENST00000540013 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
MRE11-209ENST00000540013 UBE2Q2Q8WVN8 375 aa8.5□□□□□ -1.05
MRE11-209ENST00000540013 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
MRE11-209ENST00000540013 SRCIN1Q9C0H9 1055 aa8.5□□□□□ -1.05
MRE11-209ENST00000540013 LATS2Q9NRM7 1088 aa8.5□□□□□ -1.05
MRE11-209ENST00000540013 SPATA31C1P0DKV0 1188 aa8.49□□□□□ -1.05
MRE11-209ENST00000540013 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
MRE11-209ENST00000540013 WNT8BQ93098 351 aa8.49□□□□□ -1.05
MRE11-209ENST00000540013 LACRTQ9GZZ8 138 aa8.49□□□□□ -1.05
MRE11-209ENST00000540013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
MRE11-209ENST00000540013 RECKO95980 971 aa8.48□□□□□ -1.05
MRE11-209ENST00000540013 ACPPP15309 386 aa8.48□□□□□ -1.05
MRE11-209ENST00000540013 IRS1P35568 1242 aa8.48□□□□□ -1.05
MRE11-209ENST00000540013 PRPF40BQ6NWY9 871 aaKnown RBP8.48□□□□□ -1.05
MRE11-209ENST00000540013 GIMAP6Q6P9H5 292 aa8.48□□□□□ -1.05
MRE11-209ENST00000540013 ASAP3Q8TDY4 903 aa8.48□□□□□ -1.05
MRE11-209ENST00000540013 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
MRE11-209ENST00000540013 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
MRE11-209ENST00000540013 POLA1P09884 1462 aaPredicted RBP8.47□□□□□ -1.05
MRE11-209ENST00000540013 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
MRE11-209ENST00000540013 H3BRJ5 948 aa8.47□□□□□ -1.05
MRE11-209ENST00000540013 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
MRE11-209ENST00000540013 ELNP15502 786 aa8.47□□□□□ -1.05
MRE11-209ENST00000540013 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
MRE11-209ENST00000540013 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
MRE11-209ENST00000540013 EPS8L3Q8TE67 593 aaKnown RBP8.47□□□□□ -1.05
MRE11-209ENST00000540013 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
MRE11-209ENST00000540013 BAG6P46379 1132 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 ARL4DP49703 201 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
MRE11-209ENST00000540013 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms