RNA–Protein interactions for RNA: ENST00000539652.1

AC078927.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC078927.1, Length 984 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078927.1-201ENST00000539652 SNAP23O00161 211 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 ALDH1A1P00352 501 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 CTSWP56202 376 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 INTS3Q68E01 1043 aaKnown RBP12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 TTLL5Q6EMB2 1281 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 DEFB129Q9H1M3 183 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
AC078927.1-201ENST00000539652 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
AC078927.1-201ENST00000539652 MYO3BQ8WXR4 1341 aa12.39□□□□□ -0.43
AC078927.1-201ENST00000539652 HOXB7P09629 217 aa12.39□□□□□ -0.43
AC078927.1-201ENST00000539652 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
AC078927.1-201ENST00000539652 TRIOBPQ9H2D6 2365 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 ARMC5Q96C12 935 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 COA1Q9GZY4 146 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 ELP3Q9H9T3 547 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
AC078927.1-201ENST00000539652 CEP290O15078 2479 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 H0YGN5 161 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 KCNJ4P48050 445 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 SP3Q02447 781 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 CWF19L2Q2TBE0 894 aaKnown RBP12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 ZBED3Q96IU2 234 aaPredicted RBP12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 PTPN18Q99952 460 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 METTL22Q9BUU2 404 aaPredicted RBP12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 BSDC1Q9NW68 430 aaPredicted RBP12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
AC078927.1-201ENST00000539652 LAMB1P07942 1786 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 IGKV5-2P06315 115 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 RUNDC1Q96C34 613 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 ZNF333Q96JL9 665 aa12.36□□□□□ -0.43
AC078927.1-201ENST00000539652 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 TAF5LO75529 589 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 INHBEP58166 350 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 CDAN1Q8IWY9 1227 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 OPTNQ96CV9 577 aa12.35□□□□□ -0.43
AC078927.1-201ENST00000539652 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 CD209Q9NNX6 404 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 LEMD3Q9Y2U8 911 aa12.34□□□□□ -0.43
AC078927.1-201ENST00000539652 RANBP2P49792 3224 aaKnown RBP12.33□□□□□ -0.43
AC078927.1-201ENST00000539652 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 ITGA6P23229 1130 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 CHRNDQ07001 517 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 RASA3Q14644 834 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
AC078927.1-201ENST00000539652 CCL15-CCL14A0A0B4J2E2 113 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 MYO1BO43795 1136 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 CCL15Q16663 113 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 BRI3BPQ8WY22 251 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
AC078927.1-201ENST00000539652 NEURL1BA8MQ27 555 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 G2E3Q7L622 706 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 DPF3Q92784 378 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 ANKRD2Q9GZV1 360 aa12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
AC078927.1-201ENST00000539652 TCP10L2B9ZVM9 353 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 DLL1O00548 723 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 PLIN1O60240 522 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 ZNF853P0CG23 659 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 MTFR1Q15390 333 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
AC078927.1-201ENST00000539652 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms