RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 HHIPL1Q96JK4 782 aa21.46■■□□□ 1.03
SFSWAP-205ENST00000537164 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
SFSWAP-205ENST00000537164 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 VEGFBP49765 207 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 NBPF9Q3BBW0 867 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 ANGEL2Q5VTE6 544 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 SAPCD2Q86UD0 394 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 SULF1Q8IWU6 871 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 TMEM57Q8N5G2 664 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 MTMR14Q8NCE2 650 aa21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 ABT1Q9ULW3 272 aaKnown RBP21.45■■□□□ 1.02
SFSWAP-205ENST00000537164 CAVIN4Q5BKX8 364 aa21.44■■□□□ 1.02
SFSWAP-205ENST00000537164 ADM5C9JUS6 153 aa21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 GNAI2P04899 355 aa21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 DLK2Q6UY11 383 aa21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 LPIN2Q92539 896 aa21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 MYH13Q9UKX3 1938 aa21.43■■□□□ 1.02
SFSWAP-205ENST00000537164 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
SFSWAP-205ENST00000537164 SIL1Q9H173 461 aa21.42■■□□□ 1.02
SFSWAP-205ENST00000537164 WDR33Q9C0J8 1336 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 ZBTB22O15209 634 aa21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 VPS37DQ86XT2 251 aa21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 CEP126Q9P2H0 1117 aa21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 PA2G4Q9UQ80 394 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-205ENST00000537164 RLBP1P12271 317 aa21.4■■□□□ 1.02
SFSWAP-205ENST00000537164 BCAMP50895 628 aa21.4■■□□□ 1.02
SFSWAP-205ENST00000537164 MFSD14BQ5SR56 506 aa21.4■■□□□ 1.02
SFSWAP-205ENST00000537164 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-205ENST00000537164 ZNF408Q9H9D4 720 aa21.4■■□□□ 1.02
SFSWAP-205ENST00000537164 ZBTB7BO15156 539 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-205ENST00000537164 SLC5A1P13866 664 aa21.39■■□□□ 1.01
SFSWAP-205ENST00000537164 ECE1P42892 770 aa21.39■■□□□ 1.01
SFSWAP-205ENST00000537164 CDCA5Q96FF9 252 aa21.39■■□□□ 1.01
SFSWAP-205ENST00000537164 JAG2Q9Y219 1238 aa21.39■■□□□ 1.01
SFSWAP-205ENST00000537164 DLGAP5Q15398 846 aa21.38■■□□□ 1.01
SFSWAP-205ENST00000537164 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
SFSWAP-205ENST00000537164 TBC1D22AQ8WUA7 517 aa21.38■■□□□ 1.01
SFSWAP-205ENST00000537164 CAPNS2Q96L46 248 aa21.38■■□□□ 1.01
SFSWAP-205ENST00000537164 GBA2Q9HCG7 927 aaPredicted RBP21.38■■□□□ 1.01
SFSWAP-205ENST00000537164 SPDYE2BA6NHP3 402 aa21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 SPDYE6P0CI01 402 aa21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 HSPA1AP0DMV8 641 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 HSPA1BP0DMV9 641 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 C2orf69Q8N8R5 385 aa21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 SERPINA10Q9UK55 444 aa21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 COL1A1P02452 1464 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-205ENST00000537164 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 PNMA6EA0A0J9YXQ4 647 aa21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 FKBP1BP68106 108 aa21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 CFAP100Q494V2 611 aa21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 CYP4F22Q6NT55 531 aa21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 APOBEC3FQ8IUX4 373 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 IQSEC3Q9UPP2 1182 aaPredicted RBP21.36■■□□□ 1.01
SFSWAP-205ENST00000537164 F8W031 263 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 HUNKP57058 714 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 HDLBPQ00341 1268 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 POLA2Q14181 598 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 ITPRIPQ8IWB1 547 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 PRMT6Q96LA8 375 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 MRIQ9BWK5 157 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 WBP1LQ9NX94 342 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 SUGT1Q9Y2Z0 365 aa21.35■■□□□ 1.01
SFSWAP-205ENST00000537164 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-205ENST00000537164 MS4A1P11836 297 aa21.34■■□□□ 1.01
SFSWAP-205ENST00000537164 MAP2K2P36507 400 aa21.34■■□□□ 1.01
SFSWAP-205ENST00000537164 SSH3Q8TE77 659 aa21.34■■□□□ 1.01
SFSWAP-205ENST00000537164 PCDHAC2Q9Y5I4 1007 aa21.34■■□□□ 1.01
SFSWAP-205ENST00000537164 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
SFSWAP-205ENST00000537164 SCAF8Q9UPN6 1271 aaKnown RBP21.33■■□□□ 1.01
SFSWAP-205ENST00000537164 AKAP2Q9Y2D5 859 aa21.33■■□□□ 1.01
SFSWAP-205ENST00000537164 SEMA3EO15041 775 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 MYO1BO43795 1136 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 MAP2K1Q02750 393 aaPredicted RBP21.32■■□□□ 1
SFSWAP-205ENST00000537164 CHAF1AQ13111 956 aaPredicted RBP21.32■■□□□ 1
SFSWAP-205ENST00000537164 GRIK5Q16478 980 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 WDR66Q8TBY9 1149 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 PPP2R3BQ9Y5P8 575 aa21.32■■□□□ 1
SFSWAP-205ENST00000537164 TFCP2Q12800 502 aa21.31■■□□□ 1
SFSWAP-205ENST00000537164 RGMBQ6NW40 437 aa21.31■■□□□ 1
SFSWAP-205ENST00000537164 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
SFSWAP-205ENST00000537164 PANK1Q8TE04 598 aa21.31■■□□□ 1
SFSWAP-205ENST00000537164 GNL3LQ9NVN8 582 aaKnown RBP21.31■■□□□ 1
SFSWAP-205ENST00000537164 AOX1Q06278 1338 aa21.3■■□□□ 1
SFSWAP-205ENST00000537164 A0A1B0GUL7 405 aa21.3■■□□□ 1
SFSWAP-205ENST00000537164 CRKP46108 304 aa21.3■■□□□ 1
SFSWAP-205ENST00000537164 TIMM10P62072 90 aa21.3■■□□□ 1
SFSWAP-205ENST00000537164 DEFB129Q9H1M3 183 aa21.3■■□□□ 1
SFSWAP-205ENST00000537164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.3■■□□□ 1
SFSWAP-205ENST00000537164 MAST3O60307 1309 aa21.29■■□□□ 1
SFSWAP-205ENST00000537164 PDS5AQ29RF7 1337 aaKnown RBP21.29■■□□□ 1
SFSWAP-205ENST00000537164 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
SFSWAP-205ENST00000537164 FAM155AB1AL88 458 aaPredicted RBP21.29■■□□□ 1
SFSWAP-205ENST00000537164 PHKA1P46020 1223 aa21.29■■□□□ 1
SFSWAP-205ENST00000537164 RBM5P52756 815 aaKnown RBP eCLIP21.29■■□□□ 1
SFSWAP-205ENST00000537164 NOGQ13253 232 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms