RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 ROBO1Q9Y6N7 1651 aa11.42□□□□□ -0.58
LMO3-212ENST00000535535 APBA3O96018 575 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
LMO3-212ENST00000535535 OCLNQ16625 522 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 PSAPL1Q6NUJ1 521 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 NUDT8Q8WV74 236 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 NCOA2Q15596 1464 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
LMO3-212ENST00000535535 ITGB7P26010 798 aa11.4□□□□□ -0.58
LMO3-212ENST00000535535 STK32AQ8WU08 396 aa11.4□□□□□ -0.58
LMO3-212ENST00000535535 AFF1P51825 1210 aaKnown RBP11.39□□□□□ -0.59
LMO3-212ENST00000535535 PRIMPOLQ96LW4 560 aa11.39□□□□□ -0.59
LMO3-212ENST00000535535 NACC1Q96RE7 527 aa11.39□□□□□ -0.59
LMO3-212ENST00000535535 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
LMO3-212ENST00000535535 PIK3C2BO00750 1634 aa11.39□□□□□ -0.59
LMO3-212ENST00000535535 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 OPLAHO14841 1288 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 GRIK4Q16099 956 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 COX20Q5RI15 118 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 KRT25Q7Z3Z0 450 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 A0A0A0MRY4 1105 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 PRMT3O60678 531 aa11.38□□□□□ -0.59
LMO3-212ENST00000535535 DHX32Q7L7V1 743 aaKnown RBP11.38□□□□□ -0.59
LMO3-212ENST00000535535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.38□□□□□ -0.59
LMO3-212ENST00000535535 MAP3K1Q13233 1512 aa11.37□□□□□ -0.59
LMO3-212ENST00000535535 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
LMO3-212ENST00000535535 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
LMO3-212ENST00000535535 TARSP26639 723 aaKnown RBP11.37□□□□□ -0.59
LMO3-212ENST00000535535 FAM35AQ86V20 835 aa11.37□□□□□ -0.59
LMO3-212ENST00000535535 TRPM4Q8TD43 1214 aa11.37□□□□□ -0.59
LMO3-212ENST00000535535 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
LMO3-212ENST00000535535 PCSK7Q16549 785 aa11.36□□□□□ -0.59
LMO3-212ENST00000535535 TREML1Q86YW5 311 aa11.36□□□□□ -0.59
LMO3-212ENST00000535535 LPIN3Q9BQK8 851 aa11.36□□□□□ -0.59
LMO3-212ENST00000535535 USP20Q9Y2K6 914 aa11.36□□□□□ -0.59
LMO3-212ENST00000535535 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
LMO3-212ENST00000535535 PHLPP1O60346 1717 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 RGS9O75916 674 aaPredicted RBP11.35□□□□□ -0.59
LMO3-212ENST00000535535 SASH3O75995 380 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 EGFRP00533 1210 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 RARAP10276 462 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 CPB1P15086 417 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 ELNP15502 786 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 LTKP29376 864 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 GPLD1P80108 840 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 FRRS1LQ9P0K9 344 aa11.35□□□□□ -0.59
LMO3-212ENST00000535535 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 ATG7O95352 703 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 SELPP16109 830 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 GRIK5Q16478 980 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 RSPO4Q2I0M5 234 aaPredicted RBP11.34□□□□□ -0.59
LMO3-212ENST00000535535 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
LMO3-212ENST00000535535 TSPY4P0CV99 314 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 TSPY10P0CW01 314 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 RAC1P63000 192 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 SAP130Q9H0E3 1048 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 GTF3C3Q9Y5Q9 886 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
LMO3-212ENST00000535535 DUOX2Q9NRD8 1548 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 TET3O43151 1660 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 PLAURQ03405 335 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 ADGRE1Q14246 886 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 XP32Q5T750 250 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 RGL4Q8IZJ4 473 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 FMR1NBQ8N0W7 255 aaPredicted RBP11.32□□□□□ -0.6
LMO3-212ENST00000535535 COL26A1Q96A83 441 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 KCNMB2Q9Y691 235 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 C9orf172C9J069 976 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 MLLT1Q03111 559 aaPredicted RBP11.32□□□□□ -0.6
LMO3-212ENST00000535535 MBTPS1Q14703 1052 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
LMO3-212ENST00000535535 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
LMO3-212ENST00000535535 EFCAB6Q5THR3 1501 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 XYLBO75191 536 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 NRLP54845 237 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
LMO3-212ENST00000535535 DMRTC2Q8IXT2 367 aaPredicted RBP11.31□□□□□ -0.6
LMO3-212ENST00000535535 COL16A1Q07092 1604 aaPredicted RBP11.31□□□□□ -0.6
LMO3-212ENST00000535535 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
LMO3-212ENST00000535535 TMEM2Q9UHN6 1383 aa11.3□□□□□ -0.6
LMO3-212ENST00000535535 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
LMO3-212ENST00000535535 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
LMO3-212ENST00000535535 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
LMO3-212ENST00000535535 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
LMO3-212ENST00000535535 TLR7Q9NYK1 1049 aaKnown RBP11.3□□□□□ -0.6
LMO3-212ENST00000535535 TNFRSF10BO14763 440 aa11.29□□□□□ -0.6
LMO3-212ENST00000535535 NEFLP07196 543 aa11.29□□□□□ -0.6
LMO3-212ENST00000535535 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
LMO3-212ENST00000535535 CAPN12Q6ZSI9 719 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms