RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 GRK4P32298 578 aa13.34□□□□□ -0.27
NEDD8-MDP1-202ENST00000534348 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
NEDD8-MDP1-202ENST00000534348 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
NEDD8-MDP1-202ENST00000534348 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
NEDD8-MDP1-202ENST00000534348 LAMA2P24043 3122 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-202ENST00000534348 UNCXA6NJT0 531 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 TLR2O60603 784 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CTGFP29279 349 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PSMC4P43686 418 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 BCAMP50895 628 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 GTF2A2P52657 109 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 U2AF1L4Q8WU68 220 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 RASA3Q14644 834 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 COA1Q9GZY4 146 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PPP2R3BQ9Y5P8 575 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 AOX1Q06278 1338 aa13.32□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MYO1BO43795 1136 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 GNRH1P01148 92 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 OSBPP22059 807 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 KLRK1P26718 216 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PRMT2P55345 433 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 ZBTB38Q8NAP3 1195 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PRMT6Q96LA8 375 aaPredicted RBP13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 TRIM47Q96LD4 638 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 UNC93B1Q9H1C4 597 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 SRRDQ9UH36 339 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CPA4Q9UI42 421 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 ZNF804BA4D1E1 1349 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 DLG5Q8TDM6 1919 aa13.31□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 COL9A1P20849 921 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MMP14P50281 582 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 UBXN2AP68543 259 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 VGLL4Q14135 290 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 C7orf61Q8IZ16 206 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 FAM161BQ96MY7 647 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 GDF15Q99988 308 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 RAPGEFL1Q9UHV5 662 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MYPNQ86TC9 1320 aa13.3□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PDE8AO60658 829 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 SGPL1O95470 568 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 SYN1P17600 705 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 HOXD10P28358 340 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 LAMB1P07942 1786 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 BMP8BP34820 402 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 MYD88Q99836 296 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CSADQ9Y600 493 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 IRS2Q9Y4H2 1338 aa13.28□□□□□ -0.28
NEDD8-MDP1-202ENST00000534348 CETPP11597 493 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PRKCZQ05513 592 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 DEFB118Q96PH6 123 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 PLEKHF1Q96S99 279 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 MAGEA10P43363 369 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 DIS3LQ8TF46 1054 aaKnown RBP13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 ELNP15502 786 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 KCNJ4P48050 445 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 RIPK4P57078 832 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 GREM2Q9H772 168 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
NEDD8-MDP1-202ENST00000534348 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms