RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 IL1R1P14778 569 aa27.14■■□□□ 1.94
SSH3-211ENST00000534112 FBXO46Q6PJ61 603 aaPredicted RBP27.14■■□□□ 1.94
SSH3-211ENST00000534112 CHMP3Q9Y3E7 222 aa27.14■■□□□ 1.94
SSH3-211ENST00000534112 PCDHAC2Q9Y5I4 1007 aa27.14■■□□□ 1.94
SSH3-211ENST00000534112 F8W031 263 aaPredicted RBP27.13■■□□□ 1.93
SSH3-211ENST00000534112 ALDH1A1P00352 501 aa27.13■■□□□ 1.93
SSH3-211ENST00000534112 MAP3K11Q16584 847 aa27.13■■□□□ 1.93
SSH3-211ENST00000534112 ZNF804AQ7Z570 1209 aa27.13■■□□□ 1.93
SSH3-211ENST00000534112 COL1A1P02452 1464 aaPredicted RBP27.13■■□□□ 1.93
SSH3-211ENST00000534112 F6X3S4 739 aa27.12■■□□□ 1.93
SSH3-211ENST00000534112 PPP1R12BO60237 982 aaPredicted RBP27.12■■□□□ 1.93
SSH3-211ENST00000534112 INHBEP58166 350 aa27.12■■□□□ 1.93
SSH3-211ENST00000534112 CFAP100Q494V2 611 aa27.12■■□□□ 1.93
SSH3-211ENST00000534112 BEND3Q5T5X7 828 aa27.12■■□□□ 1.93
SSH3-211ENST00000534112 PPP2R3BQ9Y5P8 575 aa27.12■■□□□ 1.93
SSH3-211ENST00000534112 SPDYE2BA6NHP3 402 aa27.11■■□□□ 1.93
SSH3-211ENST00000534112 MANSC4A6NHS7 340 aaPredicted RBP27.11■■□□□ 1.93
SSH3-211ENST00000534112 MYO1BO43795 1136 aa27.11■■□□□ 1.93
SSH3-211ENST00000534112 SPDYE6P0CI01 402 aa27.11■■□□□ 1.93
SSH3-211ENST00000534112 FKBP1AP62942 108 aaKnown RBP27.11■■□□□ 1.93
SSH3-211ENST00000534112 LMBR1LQ6UX01 489 aa27.11■■□□□ 1.93
SSH3-211ENST00000534112 CLMNQ96JQ2 1002 aa27.11■■□□□ 1.93
SSH3-211ENST00000534112 PRMT6Q96LA8 375 aaPredicted RBP27.11■■□□□ 1.93
SSH3-211ENST00000534112 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.11■■□□□ 1.93
SSH3-211ENST00000534112 CLRN2A0PK11 232 aa27.1■■□□□ 1.93
SSH3-211ENST00000534112 EXOSC9Q06265 439 aaKnown RBP27.1■■□□□ 1.93
SSH3-211ENST00000534112 SUPT20HL1Q3ZLR7 823 aa27.1■■□□□ 1.93
SSH3-211ENST00000534112 PRPF38BQ5VTL8 546 aaKnown RBP27.1■■□□□ 1.93
SSH3-211ENST00000534112 IFNL1Q8IU54 200 aa27.1■■□□□ 1.93
SSH3-211ENST00000534112 WDR63Q8IWG1 891 aa27.1■■□□□ 1.93
SSH3-211ENST00000534112 SALL2Q9Y467 1007 aaPredicted RBP27.1■■□□□ 1.93
SSH3-211ENST00000534112 ZBTB48P10074 688 aaPredicted RBP27.09■■□□□ 1.93
SSH3-211ENST00000534112 EPHA10Q5JZY3 1008 aa27.09■■□□□ 1.93
SSH3-211ENST00000534112 JAG2Q9Y219 1238 aa27.09■■□□□ 1.93
SSH3-211ENST00000534112 UNCXA6NJT0 531 aa27.08■■□□□ 1.93
SSH3-211ENST00000534112 CCDC57Q2TAC2 916 aa27.08■■□□□ 1.93
SSH3-211ENST00000534112 LDHAL6AQ6ZMR3 332 aa27.08■■□□□ 1.93
SSH3-211ENST00000534112 WNK4Q96J92 1243 aa27.08■■□□□ 1.93
SSH3-211ENST00000534112 ZNF594Q96JF6 807 aaPredicted RBP27.08■■□□□ 1.93
SSH3-211ENST00000534112 VEZTQ9HBM0 779 aa27.08■■□□□ 1.93
SSH3-211ENST00000534112 SSC5DA1L4H1 1573 aa27.07■■□□□ 1.92
SSH3-211ENST00000534112 PLIN1O60240 522 aa27.07■■□□□ 1.92
SSH3-211ENST00000534112 TAF7LQ5H9L4 462 aa27.07■■□□□ 1.92
SSH3-211ENST00000534112 NBPF12Q5TAG4 269 aaPredicted RBP27.07■■□□□ 1.92
SSH3-211ENST00000534112 PCDH10Q9P2E7 1040 aa27.07■■□□□ 1.92
SSH3-211ENST00000534112 AOX1Q06278 1338 aa27.07■■□□□ 1.92
SSH3-211ENST00000534112 CNNM1Q9NRU3 951 aa27.06■■□□□ 1.92
SSH3-211ENST00000534112 GRM8O00222 908 aa27.05■■□□□ 1.92
SSH3-211ENST00000534112 IGF2BP3O00425 579 aaKnown RBP eCLIP27.05■■□□□ 1.92
SSH3-211ENST00000534112 RBM5P52756 815 aaKnown RBP eCLIP27.05■■□□□ 1.92
SSH3-211ENST00000534112 RASA3Q14644 834 aa27.05■■□□□ 1.92
SSH3-211ENST00000534112 MRS2Q9HD23 443 aa27.05■■□□□ 1.92
SSH3-211ENST00000534112 USP2O75604 605 aaPredicted RBP27.03■■□□□ 1.92
SSH3-211ENST00000534112 IREB2P48200 963 aaKnown RBP27.03■■□□□ 1.92
SSH3-211ENST00000534112 FAM205AQ6ZU69 1335 aa27.03■■□□□ 1.92
SSH3-211ENST00000534112 TRIM17Q9Y577 477 aa27.03■■□□□ 1.92
SSH3-211ENST00000534112 SPINK5Q9NQ38 1064 aaPredicted RBP27.02■■□□□ 1.92
SSH3-211ENST00000534112 C9orf78Q9NZ63 289 aaPredicted RBP27.02■■□□□ 1.92
SSH3-211ENST00000534112 GJA5P36382 358 aa27.01■■□□□ 1.91
SSH3-211ENST00000534112 OTOP1Q7RTM1 612 aa27.01■■□□□ 1.91
SSH3-211ENST00000534112 TDRD7Q8NHU6 1098 aaKnown RBP27.01■■□□□ 1.91
SSH3-211ENST00000534112 HTTP42858 3142 aa27■■□□□ 1.91
SSH3-211ENST00000534112 UBE4AQ14139 1066 aa27■■□□□ 1.91
SSH3-211ENST00000534112 MFSD14BQ5SR56 506 aa27■■□□□ 1.91
SSH3-211ENST00000534112 OTUD7BQ6GQQ9 843 aa27■■□□□ 1.91
SSH3-211ENST00000534112 ANKRD13AQ8IZ07 590 aa27■■□□□ 1.91
SSH3-211ENST00000534112 CACNA1FO60840 1977 aa26.99■■□□□ 1.91
SSH3-211ENST00000534112 HIBADHP31937 336 aaKnown RBP26.99■■□□□ 1.91
SSH3-211ENST00000534112 GYG1P46976 350 aa26.99■■□□□ 1.91
SSH3-211ENST00000534112 SPDYE2Q495Y8 402 aa26.99■■□□□ 1.91
SSH3-211ENST00000534112 FAM84BQ96KN1 310 aaPredicted RBP26.99■■□□□ 1.91
SSH3-211ENST00000534112 ZNF70Q9UC06 446 aaPredicted RBP26.99■■□□□ 1.91
SSH3-211ENST00000534112 SERPINA10Q9UK55 444 aa26.99■■□□□ 1.91
SSH3-211ENST00000534112 TTF2Q9UNY4 1162 aaKnown RBP26.99■■□□□ 1.91
SSH3-211ENST00000534112 ALDH1L1O75891 902 aa26.98■■□□□ 1.91
SSH3-211ENST00000534112 CRHR2Q13324 411 aa26.98■■□□□ 1.91
SSH3-211ENST00000534112 TNFAIP1Q13829 316 aa26.98■■□□□ 1.91
SSH3-211ENST00000534112 PTPN18Q99952 460 aa26.98■■□□□ 1.91
SSH3-211ENST00000534112 SLC4A10Q6U841 1118 aa26.97■■□□□ 1.91
SSH3-211ENST00000534112 ERO1AQ96HE7 468 aa26.97■■□□□ 1.91
SSH3-211ENST00000534112 PUS3Q9BZE2 481 aaKnown RBP26.97■■□□□ 1.91
SSH3-211ENST00000534112 SRCIN1Q9C0H9 1055 aa26.97■■□□□ 1.91
SSH3-211ENST00000534112 TDRD3Q9H7E2 651 aaKnown RBP26.97■■□□□ 1.91
SSH3-211ENST00000534112 TESPA1A2RU30 521 aaPredicted RBP26.96■■□□□ 1.91
SSH3-211ENST00000534112 DZIP1LQ8IYY4 767 aaKnown RBP26.96■■□□□ 1.91
SSH3-211ENST00000534112 INTS3Q68E01 1043 aaKnown RBP26.95■■□□□ 1.9
SSH3-211ENST00000534112 CD99L2Q8TCZ2 262 aa26.95■■□□□ 1.9
SSH3-211ENST00000534112 KAZALD1Q96I82 304 aa26.95■■□□□ 1.9
SSH3-211ENST00000534112 SUCLG2Q96I99 432 aa26.95■■□□□ 1.9
SSH3-211ENST00000534112 TEPSINQ96N21 525 aa26.95■■□□□ 1.9
SSH3-211ENST00000534112 ELP3Q9H9T3 547 aa26.95■■□□□ 1.9
SSH3-211ENST00000534112 MKI67P46013 3256 aaKnown RBP26.94■■□□□ 1.9
SSH3-211ENST00000534112 CDAN1Q8IWY9 1227 aa26.94■■□□□ 1.9
SSH3-211ENST00000534112 OPTNQ96CV9 577 aa26.94■■□□□ 1.9
SSH3-211ENST00000534112 PTPN22Q9Y2R2 807 aa26.94■■□□□ 1.9
SSH3-211ENST00000534112 RIPOR2Q9Y4F9 1068 aa26.94■■□□□ 1.9
SSH3-211ENST00000534112 CENPFP49454 3210 aa26.93■■□□□ 1.9
SSH3-211ENST00000534112 A0A1B0GUL6 1792 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 POTEFA5A3E0 1075 aa26.92■■□□□ 1.9
SSH3-211ENST00000534112 TCP10L2B9ZVM9 353 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms