RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 EYA2O00167 538 aa27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 MMP14P50281 582 aa27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 PTPN12Q05209 780 aaKnown RBP27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 VPS37DQ86XT2 251 aa27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 VGLL2Q8N8G2 317 aa27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 CDCA5Q96FF9 252 aa27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 GBA2Q9HCG7 927 aaPredicted RBP27.4■■□□□ 1.98
NDUFS3-210ENST00000533105 C2orf69Q8N8R5 385 aa27.39■■□□□ 1.98
NDUFS3-210ENST00000533105 TDRD7Q8NHU6 1098 aaKnown RBP27.39■■□□□ 1.98
NDUFS3-210ENST00000533105 PITPNM2Q9BZ72 1349 aa27.39■■□□□ 1.97
NDUFS3-210ENST00000533105 HUNKP57058 714 aa27.38■■□□□ 1.97
NDUFS3-210ENST00000533105 AIDAQ96BJ3 306 aa27.38■■□□□ 1.97
NDUFS3-210ENST00000533105 SIL1Q9H173 461 aa27.38■■□□□ 1.97
NDUFS3-210ENST00000533105 GNAI3P08754 354 aa27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 FKBP1AP62942 108 aaKnown RBP27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 CAVIN4Q5BKX8 364 aa27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 ZKSCAN2Q63HK3 967 aa27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 HHIPL1Q96JK4 782 aa27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 IQSEC3Q9UPP2 1182 aaPredicted RBP27.37■■□□□ 1.97
NDUFS3-210ENST00000533105 PUM3Q15397 648 aaKnown RBP27.36■■□□□ 1.97
NDUFS3-210ENST00000533105 DLGAP5Q15398 846 aa27.36■■□□□ 1.97
NDUFS3-210ENST00000533105 FBXO33Q7Z6M2 555 aa27.36■■□□□ 1.97
NDUFS3-210ENST00000533105 FAM205AQ6ZU69 1335 aa27.36■■□□□ 1.97
NDUFS3-210ENST00000533105 AOC2O75106 756 aa27.35■■□□□ 1.97
NDUFS3-210ENST00000533105 FRAT2O75474 233 aaPredicted RBP27.35■■□□□ 1.97
NDUFS3-210ENST00000533105 IFIT1P09914 478 aaKnown RBP27.35■■□□□ 1.97
NDUFS3-210ENST00000533105 MFSD14BQ5SR56 506 aa27.35■■□□□ 1.97
NDUFS3-210ENST00000533105 FOXN1O15353 648 aa27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 MAP2K1Q02750 393 aaPredicted RBP27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 COL13A1Q5TAT6 717 aaPredicted RBP27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 PRAMEF18Q5VWM3 479 aa27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 ATG9AQ7Z3C6 839 aa27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 WBP1LQ9NX94 342 aa27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 PA2G4Q9UQ80 394 aaKnown RBP27.34■■□□□ 1.97
NDUFS3-210ENST00000533105 BCAMP50895 628 aa27.33■■□□□ 1.97
NDUFS3-210ENST00000533105 CHAF1AQ13111 956 aaPredicted RBP27.33■■□□□ 1.97
NDUFS3-210ENST00000533105 CFAP100Q494V2 611 aa27.33■■□□□ 1.97
NDUFS3-210ENST00000533105 ZBED3Q96IU2 234 aaPredicted RBP27.33■■□□□ 1.97
NDUFS3-210ENST00000533105 PCDHAC2Q9Y5I4 1007 aa27.33■■□□□ 1.97
NDUFS3-210ENST00000533105 CIAO1O76071 339 aa27.32■■□□□ 1.96
NDUFS3-210ENST00000533105 SLC5A1P13866 664 aa27.32■■□□□ 1.96
NDUFS3-210ENST00000533105 FGFR2P21802 821 aa27.32■■□□□ 1.96
NDUFS3-210ENST00000533105 RBM5P52756 815 aaKnown RBP eCLIP27.32■■□□□ 1.96
NDUFS3-210ENST00000533105 FBXO3Q9UK99 471 aa27.32■■□□□ 1.96
NDUFS3-210ENST00000533105 TMEM57Q8N5G2 664 aa27.31■■□□□ 1.96
NDUFS3-210ENST00000533105 CEP126Q9P2H0 1117 aa27.31■■□□□ 1.96
NDUFS3-210ENST00000533105 SRGAP3O43295 1099 aa27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 MAP2K2P36507 400 aa27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 RGMBQ6NW40 437 aa27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 APOBEC3FQ8IUX4 373 aaKnown RBP27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 MTMR14Q8NCE2 650 aa27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 LPIN2Q92539 896 aa27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 TTF2Q9UNY4 1162 aaKnown RBP27.3■■□□□ 1.96
NDUFS3-210ENST00000533105 GNAI2P04899 355 aa27.29■■□□□ 1.96
NDUFS3-210ENST00000533105 IL15P40933 162 aaPredicted RBP27.29■■□□□ 1.96
NDUFS3-210ENST00000533105 BEGAINQ9BUH8 593 aa27.29■■□□□ 1.96
NDUFS3-210ENST00000533105 COPRSQ9NQ92 184 aa27.29■■□□□ 1.96
NDUFS3-210ENST00000533105 SPDYE2BA6NHP3 402 aa27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 MYO1BO43795 1136 aa27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 SPDYE6P0CI01 402 aa27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 CTCFP49711 727 aaPredicted RBP27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 ZNF157P51786 506 aaPredicted RBP27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 ATP2B3Q16720 1220 aa27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 FTSJ3Q8IY81 847 aaKnown RBP27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 PRMT6Q96LA8 375 aaPredicted RBP27.28■■□□□ 1.96
NDUFS3-210ENST00000533105 CLRN2A0PK11 232 aa27.27■■□□□ 1.96
NDUFS3-210ENST00000533105 NF2P35240 595 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 FKBP1BP68106 108 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 NOGQ13253 232 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 TTLL12Q14166 644 aaPredicted RBP27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 MOB2Q70IA6 237 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 TBC1D22AQ8WUA7 517 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 THSD7BQ9C0I4 1608 aa27.26■■□□□ 1.95
NDUFS3-210ENST00000533105 MTX1Q13505 466 aa27.25■■□□□ 1.95
NDUFS3-210ENST00000533105 GRIK5Q16478 980 aa27.25■■□□□ 1.95
NDUFS3-210ENST00000533105 CCDC102AQ96A19 550 aa27.25■■□□□ 1.95
NDUFS3-210ENST00000533105 VEZTQ9HBM0 779 aa27.25■■□□□ 1.95
NDUFS3-210ENST00000533105 DZIP1LQ8IYY4 767 aaKnown RBP27.24■■□□□ 1.95
NDUFS3-210ENST00000533105 ZIC5Q96T25 663 aa27.24■■□□□ 1.95
NDUFS3-210ENST00000533105 DEFB129Q9H1M3 183 aa27.24■■□□□ 1.95
NDUFS3-210ENST00000533105 SERPINA10Q9UK55 444 aa27.24■■□□□ 1.95
NDUFS3-210ENST00000533105 AOX1Q06278 1338 aa27.23■■□□□ 1.95
NDUFS3-210ENST00000533105 LBX1P52954 281 aa27.23■■□□□ 1.95
NDUFS3-210ENST00000533105 IFFO2Q5TF58 517 aa27.23■■□□□ 1.95
NDUFS3-210ENST00000533105 ITPRIPQ8IWB1 547 aa27.23■■□□□ 1.95
NDUFS3-210ENST00000533105 FAM155AB1AL88 458 aaPredicted RBP27.22■■□□□ 1.95
NDUFS3-210ENST00000533105 UBE2Q2LH0YL09 131 aa27.22■■□□□ 1.95
NDUFS3-210ENST00000533105 PRKG1Q13976 671 aa27.22■■□□□ 1.95
NDUFS3-210ENST00000533105 CRKP46108 304 aa27.21■■□□□ 1.95
NDUFS3-210ENST00000533105 TNS4Q8IZW8 715 aa27.21■■□□□ 1.95
NDUFS3-210ENST00000533105 PAPPA2Q9BXP8 1791 aa27.21■■□□□ 1.95
NDUFS3-210ENST00000533105 PNMA6EA0A0J9YXQ4 647 aa27.2■■□□□ 1.94
NDUFS3-210ENST00000533105 HSPA8P11142 646 aaKnown RBP27.2■■□□□ 1.94
NDUFS3-210ENST00000533105 RLBP1P12271 317 aa27.2■■□□□ 1.94
NDUFS3-210ENST00000533105 TDRD3Q9H7E2 651 aaKnown RBP27.2■■□□□ 1.94
NDUFS3-210ENST00000533105 GNL3LQ9NVN8 582 aaKnown RBP27.2■■□□□ 1.94
NDUFS3-210ENST00000533105 SLC10A3P09131 477 aa27.19■■□□□ 1.94
NDUFS3-210ENST00000533105 ADORA1P30542 326 aa27.19■■□□□ 1.94
NDUFS3-210ENST00000533105 TFCP2Q12800 502 aa27.19■■□□□ 1.94
NDUFS3-210ENST00000533105 PRDM10Q9NQV6 1147 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms