RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	TGFBRAP1	Q8WUH2	860 aa		18.25	■□□□□ 0.51
PPFIA1-222	ENST00000532504	GPAA1	O43292	621 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	PPP4R3B	Q5MIZ7	849 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	GSE1	Q14687	1217 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	FAM227B	Q96M60	508 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	DBNDD1	Q9H9R9	158 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ABCC4	O15439	1325 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ZNF804B	A4D1E1	1349 aa		18.24	■□□□□ 0.51
PPFIA1-222	ENST00000532504	STIM1	Q13586	685 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ARHGEF1	Q92888	912 aa	Known RBP	18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	SOS2	Q07890	1332 aa	Predicted RBP	18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ZNF532	Q9HCE3	1301 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	NAP1L1	P55209	391 aa	Known RBP	18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	CREB3L3	Q68CJ9	461 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	MARCH10	Q8NA82	808 aa	Predicted RBP	18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	TANGO6	Q9C0B7	1094 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	USP40	Q9NVE5	1235 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ERVV-1	B6SEH8	477 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	SMC2	O95347	1197 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	APPBP2	Q92624	585 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	TMEM266	Q2M3C6	531 aa		18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.23	■□□□□ 0.51
PPFIA1-222	ENST00000532504	TEKT1	Q969V4	418 aa		18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	CCDC102B	Q68D86	513 aa		18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	CCAR2	Q8N163	923 aa	Known RBP	18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	HELLS	Q9NRZ9	838 aa		18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	TFIP11	Q9UBB9	837 aa	Known RBP	18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	LIG1	P18858	919 aa		18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	DALRD3	Q5D0E6	543 aa	Known RBP	18.22	■□□□□ 0.51
PPFIA1-222	ENST00000532504	ZNF853	P0CG23	659 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	EAF2	Q96CJ1	260 aa	Predicted RBP	18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504		B4E1Z4	1266 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	R3HDM1	Q15032	1099 aa	Known RBP	18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	KBTBD3	Q8NAB2	608 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	QRICH2	Q9H0J4	1663 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	NAPA	P54920	295 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	RAB34	Q9BZG1	259 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	UBA5	Q9GZZ9	404 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	TCP10L2	B9ZVM9	353 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	GNAQ	P50148	359 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	PANK2	Q9BZ23	570 aa		18.21	■□□□□ 0.51
PPFIA1-222	ENST00000532504	XDH	P47989	1333 aa		18.21	■□□□□ 0.5
PPFIA1-222	ENST00000532504	BAG4	O95429	457 aa	Known RBP	18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SSH3	Q8TE77	659 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	ZC3H13	Q5T200	1668 aa	Known RBP	18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PREX1	Q8TCU6	1659 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	C21orf2	O43822	256 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	APOBR	Q0VD83	1088 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TRIM5	Q9C035	493 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	VTI1A	Q96AJ9	217 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TBC1D2	Q9BYX2	928 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	NARF	Q9UHQ1	456 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	DIP2A	Q14689	1571 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	RAD17	O75943	681 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SMARCC2	Q8TAQ2	1214 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	ALG1	Q9BT22	464 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	GPCPD1	Q9NPB8	672 aa		18.2	■□□□□ 0.5
PPFIA1-222	ENST00000532504	BBOX1	O75936	387 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CYP19A1	P11511	503 aa	Predicted RBP	18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SLC27A3	Q5K4L6	730 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	ZFYVE27	Q5T4F4	411 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PDE8B	O95263	885 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CPA1	P15085	419 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PHKA1	P46020	1223 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CAMK4	Q16566	473 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TTLL6	Q8N841	843 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	FER1L4	A9Z1Z3	1794 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SSFA2	P28290	1259 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	ADORA1	P30542	326 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	GPR101	Q96P66	508 aa	Predicted RBP	18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SETBP1	Q9Y6X0	1596 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	FILIP1L	Q4L180	1135 aa		18.19	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SPATA31A5	Q5VU36	1347 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SPATA31A7	Q8IWB4	1347 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TBC1D9B	Q66K14	1250 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SYNE4	Q8N205	404 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	ZNF592	Q92610	1267 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	MPHOSPH6	Q99547	160 aa	Known RBP	18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PPP4R3A	Q6IN85	833 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CTDSPL2	Q05D32	466 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TMOD4	Q9NZQ9	345 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	BIN2	Q9UBW5	565 aa	Predicted RBP	18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	COL15A1	P39059	1388 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	FRMPD1	Q5SYB0	1578 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SPATA31D1	Q6ZQQ2	1576 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TMX3	Q96JJ7	454 aa		18.18	■□□□□ 0.5
PPFIA1-222	ENST00000532504	LETM1	O95202	739 aa	Predicted RBP	18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CCDC39	Q9UFE4	941 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PDIA4	P13667	645 aa	Known RBP	18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SSH2	Q76I76	1423 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	GDPD2	Q9HCC8	539 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CCDC93	Q567U6	631 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	CLEC4G	Q6UXB4	293 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	RRP36	Q96EU6	259 aa	Known RBP	18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TBC1D32	Q96NH3	1257 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	PDCL3	Q9H2J4	239 aa		18.17	■□□□□ 0.5
PPFIA1-222	ENST00000532504	TSPY26P	Q9H489	355 aa		18.16	■□□□□ 0.5
PPFIA1-222	ENST00000532504	SERPINC1	P01008	464 aa		18.16	■□□□□ 0.5
PPFIA1-222	ENST00000532504	NPR1	P16066	1061 aa		18.16	■□□□□ 0.5

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