RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 TDRD7Q8NHU6 1098 aaKnown RBP8.72□□□□□ -1.01
C11orf54-207ENST00000528288 PHKBQ93100 1093 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 PCDH11XQ9BZA7 1347 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 PCDH11YQ9BZA8 1340 aa8.72□□□□□ -1.01
C11orf54-207ENST00000528288 CPLX1O14810 134 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 GPAA1O43292 621 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 IL2RBP14784 551 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 IFIT5Q13325 482 aaKnown RBP8.71□□□□□ -1.01
C11orf54-207ENST00000528288 TCIRG1Q13488 830 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 TPD52L1Q16890 204 aaPredicted RBP8.71□□□□□ -1.01
C11orf54-207ENST00000528288 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 C8orf76Q96K31 380 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 CNNM1Q9NRU3 951 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 TMOD3Q9NYL9 352 aa8.71□□□□□ -1.01
C11orf54-207ENST00000528288 MCAMP43121 646 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 IMMTQ16891 758 aaKnown RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 RBM43Q6ZSC3 357 aaKnown RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 CADPS2Q86UW7 1296 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 V9GYY5 206 aaPredicted RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 TNNT1P13805 278 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 HMGN5P82970 282 aaKnown RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 SLC9C2Q5TAH2 1124 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 NAA16Q6N069 864 aaPredicted RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 RALYLQ86SE5 291 aaKnown RBP8.71□□□□□ -1.02
C11orf54-207ENST00000528288 HPS5Q9UPZ3 1129 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.02
C11orf54-207ENST00000528288 ITGA6P23229 1130 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 PPP4R3BQ5MIZ7 849 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 MICU3Q86XE3 530 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 PIGBQ92521 554 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 LLPHQ9BRT6 129 aaKnown RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 WDR17Q8IZU2 1322 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF213O14771 459 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 NPHP1O15259 732 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 CHAF1AQ13111 956 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 HSP90AA4PQ58FG1 418 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 DHX40Q8IX18 779 aaKnown RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 PIH1D3Q9NQM4 214 aaKnown RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 B4E1Z4 1266 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 FAM160A1Q05DH4 1040 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 STX1AQ16623 288 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 SPECC1Q5M775 1068 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 CYB5R4Q7L1T6 521 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 TBC1D10CQ8IV04 446 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 CMTR1Q8N1G2 835 aaKnown RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ENGASEQ8NFI3 743 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ISCA1Q9BUE6 129 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 SALL1Q9NSC2 1324 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 PHKA1P46020 1223 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 KIF6Q6ZMV9 814 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF274Q96GC6 653 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ZKSCAN3Q9BRR0 538 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 WWC3Q9ULE0 1092 aa8.7□□□□□ -1.02
C11orf54-207ENST00000528288 IQSEC3Q9UPP2 1182 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-207ENST00000528288 ADAMTS7Q9UKP4 1686 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 IGSF3O75054 1194 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 NBPF3Q9H094 633 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 TOMM22Q9NS69 142 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 LAMA4Q16363 1823 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 ALS2Q96Q42 1657 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 SMC2O95347 1197 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 U2AF2P26368 475 aaKnown RBP eCLIP8.69□□□□□ -1.028e-9■■■■□ 20.1
C11orf54-207ENST00000528288 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 RRP12Q5JTH9 1297 aaKnown RBP8.69□□□□□ -1.02
C11orf54-207ENST00000528288 MB21D2Q8IYB1 491 aaPredicted RBP8.69□□□□□ -1.02
C11orf54-207ENST00000528288 MRPS27Q92552 414 aaKnown RBP8.69□□□□□ -1.02
C11orf54-207ENST00000528288 AGXT2Q9BYV1 514 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 GPR108Q9NPR9 543 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 TRMT112Q9UI30 125 aaKnown RBP8.69□□□□□ -1.02
C11orf54-207ENST00000528288 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 CLIC6Q96NY7 704 aa8.69□□□□□ -1.02
C11orf54-207ENST00000528288 CCDC69A6NI79 296 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 SKILP12757 684 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ATP2B1P20020 1258 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 SYNE3Q6ZMZ3 975 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 LRRC8AQ8IWT6 810 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 FMR1NBQ8N0W7 255 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 NCOA7Q8NI08 942 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 APPBP2Q92624 585 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 COL18A1P39060 1754 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 SPTLC2O15270 562 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 WDHD1O75717 1129 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 CIAO1O76071 339 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 TPM3P06753 285 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 CDC27P30260 824 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 NFXL1Q6ZNB6 911 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 TTLL11Q8NHH1 800 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ZBTB1Q9Y2K1 713 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF532Q9HCE3 1301 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms