RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 DZIP1LQ8IYY4 767 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 CERS5Q8N5B7 392 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 TMEM57Q8N5G2 664 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 GGA3Q9NZ52 723 aa15.09■□□□□ 0.01
TRAPPC4-209ENST00000528230 WNT10BO00744 389 aa15.08■□□□□ 0
TRAPPC4-209ENST00000528230 VEGFBP49765 207 aa15.08■□□□□ 0
TRAPPC4-209ENST00000528230 MTMR14Q8NCE2 650 aa15.08■□□□□ 0
TRAPPC4-209ENST00000528230 LPIN2Q92539 896 aa15.08■□□□□ 0
TRAPPC4-209ENST00000528230 ZBED3Q96IU2 234 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-209ENST00000528230 CEP126Q9P2H0 1117 aa15.08■□□□□ 0
TRAPPC4-209ENST00000528230 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-209ENST00000528230 SRGAP3O43295 1099 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 SLC5A1P13866 664 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 ECE1P42892 770 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 NBPF9Q3BBW0 867 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 SAPCD2Q86UD0 394 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 FTSJ3Q8IY81 847 aaKnown RBP15.07■□□□□ 0
TRAPPC4-209ENST00000528230 ECM29Q5VYK3 1845 aa15.07■□□□□ 0
TRAPPC4-209ENST00000528230 ADM5C9JUS6 153 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 MS4A1P11836 297 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 DLGAP5Q15398 846 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 MFSD14BQ5SR56 506 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 TBC1D22AQ8WUA7 517 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 SIL1Q9H173 461 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
TRAPPC4-209ENST00000528230 ARAP2Q8WZ64 1704 aa15.06■□□□□ 0
TRAPPC4-209ENST00000528230 MYH13Q9UKX3 1938 aa15.05■□□□□ 0
TRAPPC4-209ENST00000528230 ZBTB22O15209 634 aa15.05■□□□□ -0
TRAPPC4-209ENST00000528230 BCAMP50895 628 aa15.05■□□□□ -0
TRAPPC4-209ENST00000528230 C2orf69Q8N8R5 385 aa15.05■□□□□ -0
TRAPPC4-209ENST00000528230 PA2G4Q9UQ80 394 aaKnown RBP15.05■□□□□ -0
TRAPPC4-209ENST00000528230 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-209ENST00000528230 FRAT2O75474 233 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-209ENST00000528230 ATP2B3Q16720 1220 aa15.04■□□□□ -0
TRAPPC4-209ENST00000528230 DLK2Q6UY11 383 aa15.04■□□□□ -0
TRAPPC4-209ENST00000528230 APOBEC3FQ8IUX4 373 aaKnown RBP15.04■□□□□ -0
TRAPPC4-209ENST00000528230 CDCA5Q96FF9 252 aa15.04■□□□□ -0
TRAPPC4-209ENST00000528230 CAPNS2Q96L46 248 aa15.04■□□□□ -0
TRAPPC4-209ENST00000528230 GBA2Q9HCG7 927 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-209ENST00000528230 JAG2Q9Y219 1238 aa15.04■□□□□ -0
TRAPPC4-209ENST00000528230 F8W031 263 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-209ENST00000528230 RLBP1P12271 317 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 FKBP1BP68106 108 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 ATP8B2P98198 1209 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 HDLBPQ00341 1268 aaKnown RBP15.03■□□□□ -0
TRAPPC4-209ENST00000528230 CFAP100Q494V2 611 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 ITPRIPQ8IWB1 547 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 MRIQ9BWK5 157 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 SERPINA10Q9UK55 444 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 TTF2Q9UNY4 1162 aaKnown RBP15.03■□□□□ -0
TRAPPC4-209ENST00000528230 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
TRAPPC4-209ENST00000528230 PNMA6EA0A0J9YXQ4 647 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 MYO1BO43795 1136 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 HSPA1AP0DMV8 641 aaKnown RBP15.02■□□□□ -0
TRAPPC4-209ENST00000528230 HSPA1BP0DMV9 641 aaKnown RBP15.02■□□□□ -0
TRAPPC4-209ENST00000528230 MAP2K2P36507 400 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 POLA2Q14181 598 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 CYP4F22Q6NT55 531 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 PRMT6Q96LA8 375 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-209ENST00000528230 GNL3LQ9NVN8 582 aaKnown RBP15.02■□□□□ -0
TRAPPC4-209ENST00000528230 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
TRAPPC4-209ENST00000528230 IQSEC3Q9UPP2 1182 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-209ENST00000528230 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 SEMA3EO15041 775 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 HUNKP57058 714 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 MAP2K1Q02750 393 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 CHAF1AQ13111 956 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 G3BP1Q13283 466 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 PAXIP1Q6ZW49 1069 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 WDR66Q8TBY9 1149 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 SSH3Q8TE77 659 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 THSD7BQ9C0I4 1608 aa15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 COL1A1P02452 1464 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC4-209ENST00000528230 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC4-209ENST00000528230 RGMBQ6NW40 437 aa15□□□□□ -0.01
TRAPPC4-209ENST00000528230 CCDC102AQ96A19 550 aa15□□□□□ -0.01
TRAPPC4-209ENST00000528230 WBP1LQ9NX94 342 aa15□□□□□ -0.01
TRAPPC4-209ENST00000528230 PPP2R3BQ9Y5P8 575 aa15□□□□□ -0.01
TRAPPC4-209ENST00000528230 PAPPA2Q9BXP8 1791 aa15□□□□□ -0.01
TRAPPC4-209ENST00000528230 MAST3O60307 1309 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 NF2P35240 595 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 TIMM10P62072 90 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 TFCP2Q12800 502 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 DENND2AQ9ULE3 1009 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 SCAF8Q9UPN6 1271 aaKnown RBP14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
TRAPPC4-209ENST00000528230 A0A1B0GUL7 405 aa14.98□□□□□ -0.01
TRAPPC4-209ENST00000528230 CRKP46108 304 aa14.98□□□□□ -0.01
TRAPPC4-209ENST00000528230 GRIK5Q16478 980 aa14.98□□□□□ -0.01
TRAPPC4-209ENST00000528230 CCDC102BQ68D86 513 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms