RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MAP2K2P36507 400 aa23.23■■□□□ 1.31
CAPN1-203ENST00000525013 VPS37DQ86XT2 251 aa23.23■■□□□ 1.31
CAPN1-203ENST00000525013 TNS4Q8IZW8 715 aa23.22■■□□□ 1.31
CAPN1-203ENST00000525013 FAM84BQ96KN1 310 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-203ENST00000525013 THSD7BQ9C0I4 1608 aa23.22■■□□□ 1.31
CAPN1-203ENST00000525013 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
CAPN1-203ENST00000525013 PRAMEF18Q5VWM3 479 aa23.21■■□□□ 1.31
CAPN1-203ENST00000525013 TDRD7Q8NHU6 1098 aaKnown RBP23.21■■□□□ 1.31
CAPN1-203ENST00000525013 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
CAPN1-203ENST00000525013 HDAC5Q9UQL6 1122 aa23.21■■□□□ 1.31
CAPN1-203ENST00000525013 IPO8O15397 1037 aaKnown RBP23.2■■□□□ 1.3
CAPN1-203ENST00000525013 PDE8BO95263 885 aa23.2■■□□□ 1.3
CAPN1-203ENST00000525013 FKBP1AP62942 108 aaKnown RBP23.2■■□□□ 1.3
CAPN1-203ENST00000525013 RGMBQ6NW40 437 aa23.2■■□□□ 1.3
CAPN1-203ENST00000525013 FRAT1Q92837 279 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-203ENST00000525013 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
CAPN1-203ENST00000525013 FAM205AQ6ZU69 1335 aa23.19■■□□□ 1.3
CAPN1-203ENST00000525013 BCAR3O75815 825 aa23.19■■□□□ 1.3
CAPN1-203ENST00000525013 RFX5P48382 616 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-203ENST00000525013 LBX1P52954 281 aa23.19■■□□□ 1.3
CAPN1-203ENST00000525013 CAVIN4Q5BKX8 364 aa23.19■■□□□ 1.3
CAPN1-203ENST00000525013 EYA2O00167 538 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 FRAT2O75474 233 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-203ENST00000525013 ZNF157P51786 506 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-203ENST00000525013 NOGQ13253 232 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 MFSD14BQ5SR56 506 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
CAPN1-203ENST00000525013 VGLL2Q8N8G2 317 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 ZBED3Q96IU2 234 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-203ENST00000525013 MEIS3Q99687 375 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 PRDM10Q9NQV6 1147 aa23.18■■□□□ 1.3
CAPN1-203ENST00000525013 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
CAPN1-203ENST00000525013 RBM5P52756 815 aaKnown RBP eCLIP23.17■■□□□ 1.3
CAPN1-203ENST00000525013 PTPN12Q05209 780 aaKnown RBP23.17■■□□□ 1.3
CAPN1-203ENST00000525013 INTS3Q68E01 1043 aaKnown RBP23.17■■□□□ 1.3
CAPN1-203ENST00000525013 FBXO33Q7Z6M2 555 aa23.17■■□□□ 1.3
CAPN1-203ENST00000525013 CCDC102AQ96A19 550 aa23.17■■□□□ 1.3
CAPN1-203ENST00000525013 SIL1Q9H173 461 aa23.17■■□□□ 1.3
CAPN1-203ENST00000525013 HSPA8P11142 646 aaKnown RBP23.16■■□□□ 1.3
CAPN1-203ENST00000525013 CHAF1AQ13111 956 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-203ENST00000525013 TTLL12Q14166 644 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-203ENST00000525013 PUM3Q15397 648 aaKnown RBP23.16■■□□□ 1.3
CAPN1-203ENST00000525013 CFAP100Q494V2 611 aa23.16■■□□□ 1.3
CAPN1-203ENST00000525013 MTMR14Q8NCE2 650 aa23.16■■□□□ 1.3
CAPN1-203ENST00000525013 PCDHAC2Q9Y5I4 1007 aa23.16■■□□□ 1.3
CAPN1-203ENST00000525013 ECM29Q5VYK3 1845 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 MYO1BO43795 1136 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 GNAI3P08754 354 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 IFIT1P09914 478 aaKnown RBP23.15■■□□□ 1.3
CAPN1-203ENST00000525013 TRIM27P14373 513 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 NF2P35240 595 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 FKBP1BP68106 108 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 ZIC5Q96T25 663 aa23.15■■□□□ 1.3
CAPN1-203ENST00000525013 BCAMP50895 628 aa23.14■■□□□ 1.29
CAPN1-203ENST00000525013 MOB2Q70IA6 237 aa23.14■■□□□ 1.29
CAPN1-203ENST00000525013 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
CAPN1-203ENST00000525013 TTF2Q9UNY4 1162 aaKnown RBP23.14■■□□□ 1.29
CAPN1-203ENST00000525013 CLRN2A0PK11 232 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 SPDYE2BA6NHP3 402 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 FAM155AB1AL88 458 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-203ENST00000525013 UBE2Q2LH0YL09 131 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 SPDYE6P0CI01 402 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 SLC5A1P13866 664 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 ATG9AQ7Z3C6 839 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 PRMT6Q96LA8 375 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-203ENST00000525013 TSKSQ9UJT2 592 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 TNNQ9UQP3 1299 aa23.13■■□□□ 1.29
CAPN1-203ENST00000525013 FGFR2P21802 821 aa23.12■■□□□ 1.29
CAPN1-203ENST00000525013 VEZTQ9HBM0 779 aa23.12■■□□□ 1.29
CAPN1-203ENST00000525013 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
CAPN1-203ENST00000525013 FBXO3Q9UK99 471 aa23.12■■□□□ 1.29
CAPN1-203ENST00000525013 PA2G4Q9UQ80 394 aaKnown RBP23.12■■□□□ 1.29
CAPN1-203ENST00000525013 MYH13Q9UKX3 1938 aa23.12■■□□□ 1.29
CAPN1-203ENST00000525013 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
CAPN1-203ENST00000525013 CIAO1O76071 339 aa23.11■■□□□ 1.29
CAPN1-203ENST00000525013 LPIN2Q92539 896 aa23.11■■□□□ 1.29
CAPN1-203ENST00000525013 DEFB129Q9H1M3 183 aa23.11■■□□□ 1.29
CAPN1-203ENST00000525013 CA12O43570 354 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 CAPN15O75808 1086 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 SLC10A3P09131 477 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 KIF23Q02241 960 aaPredicted RBP23.1■■□□□ 1.29
CAPN1-203ENST00000525013 PRKG1Q13976 671 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 TBC1D22AQ8WUA7 517 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 SERPINA10Q9UK55 444 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 AKAP11Q9UKA4 1901 aa23.1■■□□□ 1.29
CAPN1-203ENST00000525013 IL15P40933 162 aaPredicted RBP23.09■■□□□ 1.29
CAPN1-203ENST00000525013 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
CAPN1-203ENST00000525013 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
CAPN1-203ENST00000525013 AOX1Q06278 1338 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 SRGAP3O43295 1099 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 GRIK5Q16478 980 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 COPRSQ9NQ92 184 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 CASP8AP2Q9UKL3 1982 aa23.08■■□□□ 1.29
CAPN1-203ENST00000525013 ZBED9Q6R2W3 1325 aa23.08■■□□□ 1.28
CAPN1-203ENST00000525013 COL1A1P02452 1464 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-203ENST00000525013 CRKP46108 304 aa23.07■■□□□ 1.28
CAPN1-203ENST00000525013 ARMC9Q7Z3E5 817 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms