RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 LPIN2Q92539 896 aa20.38■□□□□ 0.85
PABPC1-221ENST00000522720 DCPSQ96C86 337 aaKnown RBP20.38■□□□□ 0.85
PABPC1-221ENST00000522720 SLC5A1P13866 664 aa20.37■□□□□ 0.85
PABPC1-221ENST00000522720 CST9Q5W186 159 aa20.37■□□□□ 0.85
PABPC1-221ENST00000522720 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
PABPC1-221ENST00000522720 ASTN2O75129 1339 aaPredicted RBP20.36■□□□□ 0.85
PABPC1-221ENST00000522720 PNMA6EA0A0J9YXQ4 647 aa20.36■□□□□ 0.85
PABPC1-221ENST00000522720 BCAMP50895 628 aa20.36■□□□□ 0.85
PABPC1-221ENST00000522720 KRT26Q7Z3Y9 468 aa20.36■□□□□ 0.85
PABPC1-221ENST00000522720 GGA3Q9NZ52 723 aa20.36■□□□□ 0.85
PABPC1-221ENST00000522720 JAG2Q9Y219 1238 aa20.36■□□□□ 0.85
PABPC1-221ENST00000522720 ATP8B2P98198 1209 aa20.35■□□□□ 0.85
PABPC1-221ENST00000522720 WNT10BO00744 389 aa20.34■□□□□ 0.85
PABPC1-221ENST00000522720 ATP2B3Q16720 1220 aa20.34■□□□□ 0.85
PABPC1-221ENST00000522720 NBPF9Q3BBW0 867 aa20.34■□□□□ 0.85
PABPC1-221ENST00000522720 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
PABPC1-221ENST00000522720 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
PABPC1-221ENST00000522720 IQSEC3Q9UPP2 1182 aaPredicted RBP20.34■□□□□ 0.85
PABPC1-221ENST00000522720 PITPNM2Q9BZ72 1349 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.85
PABPC1-221ENST00000522720 CELF2O95319 508 aaKnown RBP20.33■□□□□ 0.85
PABPC1-221ENST00000522720 POLA2Q14181 598 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 MFSD14BQ5SR56 506 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 SULF1Q8IWU6 871 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 SSH3Q8TE77 659 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 C1orf115Q9H7X2 142 aa20.33■□□□□ 0.85
PABPC1-221ENST00000522720 MKRN1Q9UHC7 482 aaKnown RBP20.33■□□□□ 0.85
PABPC1-221ENST00000522720 ADM5C9JUS6 153 aa20.32■□□□□ 0.84
PABPC1-221ENST00000522720 DLK2Q6UY11 383 aa20.32■□□□□ 0.84
PABPC1-221ENST00000522720 MTMR14Q8NCE2 650 aa20.32■□□□□ 0.84
PABPC1-221ENST00000522720 ZBED3Q96IU2 234 aaPredicted RBP20.32■□□□□ 0.84
PABPC1-221ENST00000522720 ABT1Q9ULW3 272 aaKnown RBP20.32■□□□□ 0.84
PABPC1-221ENST00000522720 CNTNAP1P78357 1384 aa20.32■□□□□ 0.84
PABPC1-221ENST00000522720 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
PABPC1-221ENST00000522720 F8W031 263 aaPredicted RBP20.31■□□□□ 0.84
PABPC1-221ENST00000522720 TFCP2Q12800 502 aa20.31■□□□□ 0.84
PABPC1-221ENST00000522720 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.848e-14■■■■□ 24.1
PABPC1-221ENST00000522720 MVPQ14764 893 aaKnown RBP20.31■□□□□ 0.84
PABPC1-221ENST00000522720 DLGAP5Q15398 846 aa20.31■□□□□ 0.84
PABPC1-221ENST00000522720 TBC1D22AQ8WUA7 517 aa20.31■□□□□ 0.84
PABPC1-221ENST00000522720 CHAF1AQ13111 956 aaPredicted RBP20.3■□□□□ 0.84
PABPC1-221ENST00000522720 DEFB115Q30KQ5 88 aa20.3■□□□□ 0.84
PABPC1-221ENST00000522720 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
PABPC1-221ENST00000522720 AKAP2Q9Y2D5 859 aa20.3■□□□□ 0.84
PABPC1-221ENST00000522720 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
PABPC1-221ENST00000522720 TIMM10P62072 90 aa20.29■□□□□ 0.84
PABPC1-221ENST00000522720 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
PABPC1-221ENST00000522720 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
PABPC1-221ENST00000522720 DDX19BQ9UMR2 479 aa20.29■□□□□ 0.84
PABPC1-221ENST00000522720 TTF2Q9UNY4 1162 aaKnown RBP20.29■□□□□ 0.84
PABPC1-221ENST00000522720 TLL2Q9Y6L7 1015 aa20.29■□□□□ 0.84
PABPC1-221ENST00000522720 PCNTO95613 3336 aa20.29■□□□□ 0.84
PABPC1-221ENST00000522720 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
PABPC1-221ENST00000522720 SAPCD2Q86UD0 394 aa20.28■□□□□ 0.84
PABPC1-221ENST00000522720 GNL3LQ9NVN8 582 aaKnown RBP20.28■□□□□ 0.84
PABPC1-221ENST00000522720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.28■□□□□ 0.84
PABPC1-221ENST00000522720 ARAP2Q8WZ64 1704 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 A0A1B0GUL7 405 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 ZBTB22O15209 634 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 ADORA1P30542 326 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 PHKA1P46020 1223 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 VEGFBP49765 207 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 GRIK5Q16478 980 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 PRMT6Q96LA8 375 aaPredicted RBP20.27■□□□□ 0.84
PABPC1-221ENST00000522720 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
PABPC1-221ENST00000522720 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
PABPC1-221ENST00000522720 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 SURF6O75683 361 aaKnown RBP20.26■□□□□ 0.83
PABPC1-221ENST00000522720 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 CCDC102BQ68D86 513 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 WDR66Q8TBY9 1149 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 XAGE2Q96GT9 111 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 ZBTB40Q9NUA8 1239 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 SCAF8Q9UPN6 1271 aaKnown RBP20.26■□□□□ 0.83
PABPC1-221ENST00000522720 NOP58Q9Y2X3 529 aaKnown RBP20.26■□□□□ 0.83
PABPC1-221ENST00000522720 SUGT1Q9Y2Z0 365 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 PCDHAC2Q9Y5I4 1007 aa20.26■□□□□ 0.83
PABPC1-221ENST00000522720 SEMA3EO15041 775 aa20.25■□□□□ 0.83
PABPC1-221ENST00000522720 RBM5P52756 815 aaKnown RBP eCLIP20.25■□□□□ 0.83
PABPC1-221ENST00000522720 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
PABPC1-221ENST00000522720 APOBEC3FQ8IUX4 373 aaKnown RBP20.25■□□□□ 0.83
PABPC1-221ENST00000522720 HHIPL1Q96JK4 782 aa20.25■□□□□ 0.83
PABPC1-221ENST00000522720 CHMP4BQ9H444 224 aaKnown RBP20.25■□□□□ 0.83
PABPC1-221ENST00000522720 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
PABPC1-221ENST00000522720 MYO1BO43795 1136 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 C2orf69Q8N8R5 385 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
PABPC1-221ENST00000522720 GPR108Q9NPR9 543 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 DENND2AQ9ULE3 1009 aa20.24■□□□□ 0.83
PABPC1-221ENST00000522720 CRKP46108 304 aa20.23■□□□□ 0.83
PABPC1-221ENST00000522720 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
PABPC1-221ENST00000522720 COL1A1P02452 1464 aaPredicted RBP20.23■□□□□ 0.83
PABPC1-221ENST00000522720 WDR33Q9C0J8 1336 aaKnown RBP20.23■□□□□ 0.83
PABPC1-221ENST00000522720 ECE1P42892 770 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms