RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 PRAMEF22A3QJZ6 481 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 YDJCA8MPS7 323 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 ADM5C9JUS6 153 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 PSMD14O00487 310 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 TCERG1O14776 1098 aaKnown RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 KCNQ3O43525 872 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 HTATSF1O43719 755 aaKnown RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 PRSS12P56730 875 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 TRIM26Q12899 539 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 KIF4BQ2VIQ3 1234 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 TBC1D10BQ4KMP7 808 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 TJAP1Q5JTD0 557 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 SLC10A5Q5PT55 438 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 DDX46Q7L014 1031 aaKnown RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 ZNF34Q8IZ26 560 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 CDCA5Q96FF9 252 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 EYA3Q99504 573 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 GGA3Q9NZ52 723 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 LAMA3Q16787 3333 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 KIAA0100Q14667 2235 aaKnown RBP6.5□□□□□ -1.37
SDCBP-207ENST00000520168 ERBB4Q15303 1308 aa6.5□□□□□ -1.37
SDCBP-207ENST00000520168 ZNF646O15015 1829 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 U2SURPO15042 1029 aaKnown RBP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 TBC1D8O95759 1140 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 INHBEP58166 350 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 EIF4G2P78344 907 aaKnown RBP eCLIP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 GRAPQ13588 217 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 WASHC4Q2M389 1173 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 SUSD4Q5VX71 490 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 GIGYF2Q6Y7W6 1299 aaKnown RBP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
SDCBP-207ENST00000520168 GRAPLQ8TC17 118 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 UTP14AQ9BVJ6 771 aaKnown RBP6.49□□□□□ -1.37
SDCBP-207ENST00000520168 SHTN1A0MZ66 631 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 GFRA3O60609 400 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 GPTP24298 496 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 NF2P35240 595 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 TCIRG1Q13488 830 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 HSP90AB3PQ58FF7 597 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 SLC17A8Q8NDX2 589 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 AGBL3Q8NEM8 1001 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 PNISRQ8TF01 805 aaKnown RBP6.48□□□□□ -1.37
SDCBP-207ENST00000520168 PCGF6Q9BYE7 350 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 IL21Q9HBE4 155 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 CEP290O15078 2479 aa6.48□□□□□ -1.37
SDCBP-207ENST00000520168 SMAPO00193 183 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ECE2O60344 883 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 EGFRP00533 1210 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 MMP14P50281 582 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ZNF280AP59817 542 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ARHGEF6Q15052 776 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 TAF7Q15545 349 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-207ENST00000520168 TRAF7Q6Q0C0 670 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 NBPF11Q86T75 865 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 TATDN2Q93075 761 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ERO1AQ96HE7 468 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ZBTB3Q9H5J0 574 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 DBNDD1Q9H9R9 158 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 FAM198AQ9UFP1 575 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 ARIH1Q9Y4X5 557 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-207ENST00000520168 TRIM17Q9Y577 477 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 TRIOBPQ9H2D6 2365 aa6.47□□□□□ -1.37
SDCBP-207ENST00000520168 COL1A1P02452 1464 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-207ENST00000520168 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.37
SDCBP-207ENST00000520168 RTL9Q8NET4 1388 aa6.46□□□□□ -1.37
SDCBP-207ENST00000520168 VIL1P09327 827 aaKnown RBP6.46□□□□□ -1.38
SDCBP-207ENST00000520168 PRKAR2BP31323 418 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 SCARF1Q14162 830 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 RBM26Q5T8P6 1007 aaKnown RBP6.46□□□□□ -1.38
SDCBP-207ENST00000520168 ANGEL2Q5VTE6 544 aaKnown RBP6.46□□□□□ -1.38
SDCBP-207ENST00000520168 OTUD7BQ6GQQ9 843 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 DLK2Q6UY11 383 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 TTLL7Q6ZT98 887 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 CFAP53Q96M91 514 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 MTRQ99707 1265 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 PRKD2Q9BZL6 878 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 RSPH6AQ9H0K4 717 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 PNMA3Q9UL41 463 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 NSFL1CQ9UNZ2 370 aaKnown RBP6.46□□□□□ -1.38
SDCBP-207ENST00000520168 NUDCQ9Y266 331 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 PTPN22Q9Y2R2 807 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 V9GY48 417 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-207ENST00000520168 SH3TC1Q8TE82 1336 aa6.46□□□□□ -1.38
SDCBP-207ENST00000520168 A0A1W2PPC1 479 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 MANSC4A6NHS7 340 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 UNCXA6NJT0 531 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 C6orf229H3BNL8 230 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 ZBTB48P10074 688 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 TTLL12Q14166 644 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 E2F4Q16254 413 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 PPP1R18Q6NYC8 613 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 MCM10Q7L590 875 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 ARMC9Q7Z3E5 817 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 SLC51AQ86UW1 340 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 NGEFQ8N5V2 710 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 PHACTR3Q96KR7 559 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 ZC3H12CQ9C0D7 883 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms