RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 SRPK2P78362 688 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-230ENST00000510599 TTC16Q8NEE8 873 aa7.18□□□□□ -1.26
UBE2D3-230ENST00000510599 CNTN3Q9P232 1028 aa7.18□□□□□ -1.26
UBE2D3-230ENST00000510599 ADAMTS4O75173 837 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 ACPPP15309 386 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 ATP2B4P23634 1241 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 C19orf57Q0VDD7 668 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 XKR5Q6UX68 686 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 PMEPA1Q969W9 287 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 DZANK1Q9NVP4 752 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 SOX13Q9UN79 622 aa7.17□□□□□ -1.26
UBE2D3-230ENST00000510599 SMARCA2P51531 1590 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 MEGF11A6BM72 1044 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 WDR64B1ANS9 1081 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 NFKBIEO00221 500 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 C1orf127Q8N9H9 656 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 HELQQ8TDG4 1101 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 EDEM1Q92611 657 aa7.16□□□□□ -1.26
UBE2D3-230ENST00000510599 MAP4P27816 1152 aaKnown RBP7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 TMEM102Q8N9M5 508 aaPredicted RBP7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 MFSD14AQ96MC6 490 aa7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 PIM2Q9P1W9 311 aa7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 SEPT3Q9UH03 358 aa7.15□□□□□ -1.26
UBE2D3-230ENST00000510599 RXRBP28702 533 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 NUTM2GQ5VZR2 741 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 CYP4F12Q9HCS2 524 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 ATG3Q9NT62 314 aa7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 ANGEL1Q9UNK9 670 aaKnown RBP7.14□□□□□ -1.27
UBE2D3-230ENST00000510599 PDGFAP04085 211 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 IKBKEQ14164 716 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 SGO2Q562F6 1265 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 NOM1Q5C9Z4 860 aaKnown RBP7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 BSNDQ8WZ55 320 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 HHIPQ96QV1 700 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 LEMD3Q9Y2U8 911 aa7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.13□□□□□ -1.27
UBE2D3-230ENST00000510599 TRPA1O75762 1119 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 OSMRQ99650 979 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 USP26Q9BXU7 913 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 OSBPL1AQ9BXW6 950 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 TMPRSS13Q9BYE2 586 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 CHRDQ9H2X0 955 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 SUGCTQ9HAC7 445 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 ADGRE2Q9UHX3 823 aa7.12□□□□□ -1.27
UBE2D3-230ENST00000510599 A6NHS1 94 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 EDN3P14138 238 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 HOXA10P31260 410 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 FBXL6Q8N531 539 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 SMG8Q8ND04 991 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 GGNBP2Q9H3C7 697 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 SOX17Q9H6I2 414 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 SLAIN2Q9P270 581 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 CCDC88BA6NC98 1476 aa7.11□□□□□ -1.27
UBE2D3-230ENST00000510599 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 TIAF1O95411 115 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 F13BP05160 661 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 FOSL1P15407 271 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 EIF1AXP47813 144 aaKnown RBP7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 HGSNATQ68CP4 663 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 PAOXQ6QHF9 649 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 NXPE3Q969Y0 559 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 ZKSCAN3Q9BRR0 538 aa7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 METTL22Q9BUU2 404 aaPredicted RBP7.1□□□□□ -1.27
UBE2D3-230ENST00000510599 LOC100289279A0A1B0GTE1 492 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 FAM95CA0A1B0GW59 222 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 SOX1O00570 391 aaPredicted RBP7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 PHACTR2O75167 634 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 MPSTP25325 297 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 MSMPQ1L6U9 139 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 VN1R5Q7Z5H4 357 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 VSIG10LQ86VR7 867 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 ABI1Q8IZP0 508 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
UBE2D3-230ENST00000510599 EREGO14944 169 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 USP11P51784 963 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 EHHADHQ08426 723 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 NFKBIBQ15653 356 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 EXOSC6Q5RKV6 272 aaKnown RBP7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 FBXL18Q96ME1 805 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 BHLHE41Q9C0J9 482 aaPredicted RBP7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 ATAD2BQ9ULI0 1458 aa7.08□□□□□ -1.28
UBE2D3-230ENST00000510599 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
UBE2D3-230ENST00000510599 USP5P45974 858 aa7.07□□□□□ -1.28
UBE2D3-230ENST00000510599 CCDC39Q9UFE4 941 aa7.07□□□□□ -1.28
UBE2D3-230ENST00000510599 POLIQ9UNA4 740 aa7.07□□□□□ -1.28
UBE2D3-230ENST00000510599 PRNPP04156 253 aa7.06□□□□□ -1.28
UBE2D3-230ENST00000510599 ESRRAP11474 423 aaPredicted RBP7.06□□□□□ -1.28
UBE2D3-230ENST00000510599 AAMPQ13685 434 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms