RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 FTOQ9C0B1 505 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 PUS7LQ9H0K6 701 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 ZNF213O14771 459 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 FOXP2O15409 715 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 KINO60870 393 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 MAP7D2Q96T17 732 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 FAM13BQ9NYF5 915 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 RIPOR2Q9Y4F9 1068 aa20.99■□□□□ 0.95
CCHCR1-228ENST00000509552 ANKRD18BA2A2Z9 1011 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 PPFIA3O75145 1194 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 ITGA6P23229 1130 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 ME1P48163 572 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 MYRIPQ8NFW9 859 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 CNNM1Q9NRU3 951 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 GPAA1O43292 621 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 FDPSP14324 419 aaKnown RBP20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 GPTP24298 496 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 ZNF75DP51815 510 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 NLRP10Q86W26 655 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 PLA2G4DQ86XP0 818 aa20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 MB21D2Q8IYB1 491 aaPredicted RBP20.98■□□□□ 0.95
CCHCR1-228ENST00000509552 KLF18A0A0U1RQI7 1052 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 GOLGA6L19H0YKK7 550 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 FAM160A1Q05DH4 1040 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 TTF1Q15361 905 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 STX1AQ16623 288 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 TTLL11Q8NHH1 800 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 PYCARDQ9ULZ3 195 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 RIC1Q4ADV7 1423 aa20.97■□□□□ 0.95
CCHCR1-228ENST00000509552 GOLGA8BA8MQT2 603 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 CTSWP56202 376 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 HLFQ16534 295 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 GOLPH3LQ9H4A5 285 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 GPHNQ9NQX3 736 aaPredicted RBP20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 WDR19Q8NEZ3 1342 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 PTGS1P23219 599 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 PI16Q6UXB8 463 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 UBE2Q2Q8WVN8 375 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 C8orf76Q96K31 380 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 ZNF512BQ96KM6 892 aaPredicted RBP20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 GREM2Q9H772 168 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 NWD2Q9ULI1 1742 aa20.96■□□□□ 0.95
CCHCR1-228ENST00000509552 CPLX1O14810 134 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 MCAMP43121 646 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 TRDNQ13061 729 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 SNW1Q13573 536 aaKnown RBP20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 ILDR1Q86SU0 546 aaPredicted RBP20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 SYNE4Q8N205 404 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 FSIP1Q8NA03 581 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 RTEL1Q9NZ71 1219 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 CCDC186Q7Z3E2 898 aa20.95■□□□□ 0.94
CCHCR1-228ENST00000509552 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 MTERF4Q7Z6M4 381 aaKnown RBP20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 ENGASEQ8NFI3 743 aa20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 ORC3Q9UBD5 711 aaPredicted RBP20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 ADD2P35612 726 aa20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 SLC9C2Q5TAH2 1124 aa20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
CCHCR1-228ENST00000509552 CHAF1AQ13111 956 aaPredicted RBP20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 MRPS27Q92552 414 aaKnown RBP20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 ANO10Q9NW15 660 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 ANTXR2P58335 489 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 IQCB1Q15051 598 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 SF3A1Q15459 793 aaKnown RBP20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 ADALQ6DHV7 355 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 BRAPQ7Z569 592 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 FBXO18Q8NFZ0 1043 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 PCDHA7Q9UN72 937 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 HPS5Q9UPZ3 1129 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 MYH7P12883 1935 aa20.93■□□□□ 0.94
CCHCR1-228ENST00000509552 CYP19A1P11511 503 aaPredicted RBP20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 CDC25BP30305 580 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 STK38Q15208 465 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 KCNG4Q8TDN1 519 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 BTG4Q9NY30 223 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 CLIP2Q9UDT6 1046 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 A0A1W2PQ27 194 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 A0A1W2PQ64 194 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 A0A1W2PQD8 194 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 BECN2A8MW95 431 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 C11orf57Q6ZUT1 292 aaPredicted RBP20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
CCHCR1-228ENST00000509552 PDE8AO60658 829 aa20.91■□□□□ 0.94
CCHCR1-228ENST00000509552 PDE8BO95263 885 aa20.91■□□□□ 0.94
CCHCR1-228ENST00000509552 UBE3CQ15386 1083 aa20.91■□□□□ 0.94
CCHCR1-228ENST00000509552 SARM1Q6SZW1 724 aa20.91■□□□□ 0.94
CCHCR1-228ENST00000509552 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
CCHCR1-228ENST00000509552 IDH1O75874 414 aaKnown RBP20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 YEATS4O95619 227 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 APPP05067 770 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 OTUD7BQ6GQQ9 843 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 VGLL2Q8N8G2 317 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 LINC00301Q8NCQ3 95 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 POLR3DP05423 398 aaPredicted RBP20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 UQCRFS1P1P0C7P4 283 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 SYNE3Q6ZMZ3 975 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 SDF4Q9BRK5 362 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 POLR3EQ9NVU0 708 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 ATRNO75882 1429 aa20.9■□□□□ 0.94
CCHCR1-228ENST00000509552 GTF2F1P35269 517 aaKnown RBP eCLIP20.89■□□□□ 0.949e-12■■■■□ 26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms