RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 SASH1O94885 1247 aa12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 C15orf52Q6ZUT6 534 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 SCAF8Q9UPN6 1271 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-227ENST00000508818 F8W031 263 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 ALDH1L2Q3SY69 923 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 PRAMEF18Q5VWM3 479 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 VPS37DQ86XT2 251 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
UBE2D3-227ENST00000508818 PSME4Q14997 1843 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 MROH5Q6ZUA9 1318 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 MYO1BO43795 1136 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 IL1R1P14778 569 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 RBM5P52756 815 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 JAG2Q9Y219 1238 aa12.67□□□□□ -0.38
UBE2D3-227ENST00000508818 UTYO14607 1347 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 FRAT2O75474 233 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 SLC10A3P09131 477 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 ARMC9Q7Z3E5 817 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 KAZALD1Q96I82 304 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
UBE2D3-227ENST00000508818 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 GYG1P46976 350 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 FKBP1AP62942 108 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 PRKG1Q13976 671 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 CFAP100Q494V2 611 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 CERS5Q8N5B7 392 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 ABHD8Q96I13 439 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
UBE2D3-227ENST00000508818 IRS2Q9Y4H2 1338 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 TRPA1O75762 1119 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 RABL6Q3YEC7 729 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 MFSD14BQ5SR56 506 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
UBE2D3-227ENST00000508818 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 RASAL3Q86YV0 1011 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 MTMR14Q8NCE2 650 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 ZBED3Q96IU2 234 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 API5Q9BZZ5 524 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 NOB1Q9ULX3 412 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-227ENST00000508818 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 CLRN2A0PK11 232 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 CCDC85CA6NKD9 419 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 PDE8BO95263 885 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 IFIT1P09914 478 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 UBTFL1P0CB47 393 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 DGKZQ13574 1117 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-227ENST00000508818 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 FBXO33Q7Z6M2 555 aa12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 TBC1D22AQ8WUA7 517 aa12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 PPP2R3BQ9Y5P8 575 aa12.61□□□□□ -0.39
UBE2D3-227ENST00000508818 EYA2O00167 538 aa12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 PCDHAC2Q9Y5I4 1007 aa12.6□□□□□ -0.39
UBE2D3-227ENST00000508818 SLC5A1P13866 664 aa12.59□□□□□ -0.39
UBE2D3-227ENST00000508818 BCAMP50895 628 aa12.59□□□□□ -0.39
UBE2D3-227ENST00000508818 SREBF2Q12772 1141 aa12.59□□□□□ -0.39
UBE2D3-227ENST00000508818 RASA3Q14644 834 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms