RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SEPT3Q9UH03 358 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 SALL4Q9UJQ4 1053 aa6.54□□□□□ -1.36
SMARCA5-202ENST00000508573 WDR64B1ANS9 1081 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 WNT11O96014 354 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 ACPPP15309 386 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 ARL4DP49703 201 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 RUSC1Q9BVN2 902 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 RNF208Q9H0X6 261 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 OSGEPQ9NPF4 335 aa6.53□□□□□ -1.36
SMARCA5-202ENST00000508573 NFKBIEO00221 500 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 PDE2AO00408 941 aaPredicted RBP6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 SPINK2P20155 84 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 PREPP48147 710 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 DNM1Q05193 864 aaKnown RBP6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 C8orf34Q49A92 452 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 HGSNATQ68CP4 663 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 ANKRD34AQ69YU3 496 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 EDEM1Q92611 657 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 CLP1Q92989 425 aaKnown RBP6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 WNT8BQ93098 351 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 DZANK1Q9NVP4 752 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 RNF114Q9Y508 228 aa6.52□□□□□ -1.37
SMARCA5-202ENST00000508573 A6NHS1 94 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 PCSK2P16519 638 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 RXRBP28702 533 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 DTX1Q86Y01 620 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 DHX37Q8IY37 1157 aaKnown RBP6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 RETREG2Q8NC44 543 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
SMARCA5-202ENST00000508573 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 ATP2B4P23634 1241 aa6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 XKR5Q6UX68 686 aa6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 FAM177A1Q8N128 213 aaPredicted RBP6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 MFSD14AQ96MC6 490 aa6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
SMARCA5-202ENST00000508573 SOX1O00570 391 aaPredicted RBP6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 MAP4P27816 1152 aaKnown RBP6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 C19orf57Q0VDD7 668 aa6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 NOM1Q5C9Z4 860 aaKnown RBP6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 FBXL6Q8N531 539 aa6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 PMEPA1Q969W9 287 aa6.49□□□□□ -1.37
SMARCA5-202ENST00000508573 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 YBX3P16989 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 SGO2Q562F6 1265 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 NXPE3Q969Y0 559 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 OSMRQ99650 979 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
SMARCA5-202ENST00000508573 PDGFAP04085 211 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 AAMPQ13685 434 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 IKBKEQ14164 716 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 NFKBIBQ15653 356 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 TMEM102Q8N9M5 508 aaPredicted RBP6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 SERPINA10Q9UK55 444 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 SOX13Q9UN79 622 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
SMARCA5-202ENST00000508573 BSNDQ8WZ55 320 aa6.46□□□□□ -1.38
SMARCA5-202ENST00000508573 USP26Q9BXU7 913 aa6.46□□□□□ -1.38
SMARCA5-202ENST00000508573 F13BP05160 661 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 DRD2P14416 443 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 MZF1P28698 734 aaPredicted RBP6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 EIF1AXP47813 144 aaKnown RBP6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 USP11P51784 963 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 PBXIP1Q96AQ6 731 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 CCDC97Q96F63 343 aaPredicted RBP6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 ADGRE2Q9UHX3 823 aa6.45□□□□□ -1.38
SMARCA5-202ENST00000508573 FAM95CA0A1B0GW59 222 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 EREGO14944 169 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 MPSTP25325 297 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 EXOSC6Q5RKV6 272 aaKnown RBP6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 VN1R5Q7Z5H4 357 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 SHISA5Q8N114 240 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 SMG8Q8ND04 991 aaKnown RBP6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 HELQQ8TDG4 1101 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 ZKSCAN3Q9BRR0 538 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 POLIQ9UNA4 740 aa6.44□□□□□ -1.38
SMARCA5-202ENST00000508573 PHACTR2O75167 634 aa6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 DLGAP3O95886 979 aa6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 GSTM4Q03013 218 aa6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 PAOXQ6QHF9 649 aa6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 GTF3C2Q8WUA4 911 aaPredicted RBP6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 FBLIM1Q8WUP2 373 aa6.43□□□□□ -1.38
SMARCA5-202ENST00000508573 ANGEL1Q9UNK9 670 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms