RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, human

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORT1-208	ENST00000495777	FKBP5	Q13451	457 aa	Predicted RBP	11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	R3HDML	Q9H3Y0	253 aa		11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	PCDH10	Q9P2E7	1040 aa		11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	PPP2R3B	Q9Y5P8	575 aa		11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	HTT	P42858	3142 aa		11.2	□□□□□ -0.62
SORT1-208	ENST00000495777	SPDYE2B	A6NHP3	402 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	FKTN	O75072	461 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	ALDH1A1	P00352	501 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	SPDYE6	P0CI01	402 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	INHBE	P58166	350 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	MKRN3	Q13064	507 aa	Known RBP	11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	DLGAP5	Q15398	846 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	BEND3	Q5T5X7	828 aa		11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	PRPF38B	Q5VTL8	546 aa	Known RBP	11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	ANGEL1	Q9UNK9	670 aa	Known RBP	11.19	□□□□□ -0.62
SORT1-208	ENST00000495777	MANSC4	A6NHS7	340 aa	Predicted RBP	11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	TAF5L	O75529	589 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	ZBTB48	P10074	688 aa	Predicted RBP	11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	IFIT5	Q13325	482 aa	Known RBP	11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	PRKG1	Q13976	671 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	WDR63	Q8IWG1	891 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	FAM9B	Q8IZU0	186 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	FZD1	Q9UP38	647 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	PCDHAC2	Q9Y5I4	1007 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	SPEF2	Q9C093	1822 aa		11.18	□□□□□ -0.62
SORT1-208	ENST00000495777	AOX1	Q06278	1338 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	CFAP100	Q494V2	611 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	ZNF804A	Q7Z570	1209 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	IFNL1	Q8IU54	200 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	HELB	Q8NG08	1087 aa	Predicted RBP	11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	SLC10A4	Q96EP9	437 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	CLMN	Q96JQ2	1002 aa		11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	PRMT6	Q96LA8	375 aa	Predicted RBP	11.17	□□□□□ -0.62
SORT1-208	ENST00000495777	FAM205A	Q6ZU69	1335 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777		F6X3S4	739 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	PPP1R12B	O60237	982 aa	Predicted RBP	11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	EXOSC9	Q06265	439 aa	Known RBP	11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	SUPT20HL1	Q3ZLR7	823 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	EPHA10	Q5JZY3	1008 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	LMBR1L	Q6UX01	489 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	WNK4	Q96J92	1243 aa		11.16	□□□□□ -0.62
SORT1-208	ENST00000495777	CLRN2	A0PK11	232 aa		11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	TESPA1	A2RU30	521 aa	Predicted RBP	11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	GRM8	O00222	908 aa		11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	MYO1B	O43795	1136 aa		11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	GJA5	P36382	358 aa		11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	LDHAL6A	Q6ZMR3	332 aa		11.15	□□□□□ -0.62
SORT1-208	ENST00000495777	LAMB1	P07942	1786 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777		F8W031	263 aa	Predicted RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	USP2	O75604	605 aa	Predicted RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	IREB2	P48200	963 aa	Known RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	RASA3	Q14644	834 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	CCDC57	Q2TAC2	916 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	SPDYE2	Q495Y8	402 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	OTOP1	Q7RTM1	612 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	ANKRD13A	Q8IZ07	590 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	TDRD7	Q8NHU6	1098 aa	Known RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	ZNF594	Q96JF6	807 aa	Predicted RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	SERPINA10	Q9UK55	444 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777	CHMP3	Q9Y3E7	222 aa		11.14	□□□□□ -0.63
SORT1-208	ENST00000495777		A0A1B0GUL6	1792 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	ALDH1L1	O75891	902 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	UBE4A	Q14139	1066 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	KAZALD1	Q96I82	304 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	TEPSIN	Q96N21	525 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	VEZT	Q9HBM0	779 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	CNNM1	Q9NRU3	951 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	JAG2	Q9Y219	1238 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	TRIM17	Q9Y577	477 aa		11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	MKI67	P46013	3256 aa	Known RBP	11.13	□□□□□ -0.63
SORT1-208	ENST00000495777	UTY	O14607	1347 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	CRHR2	Q13324	411 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	TNFAIP1	Q13829	316 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	TAF7L	Q5H9L4	462 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	MFSD14B	Q5SR56	506 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	INTS3	Q68E01	1043 aa	Known RBP	11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	ERO1A	Q96HE7	468 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	MS4A4A	Q96JQ5	239 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	FAM84B	Q96KN1	310 aa	Predicted RBP	11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	PTPN18	Q99952	460 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	ZNF70	Q9UC06	446 aa	Predicted RBP	11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	BRCA2	P51587	3418 aa		11.12	□□□□□ -0.63
SORT1-208	ENST00000495777	PLIN1	O60240	522 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	HIBADH	P31937	336 aa	Known RBP	11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	GYG1	P46976	350 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	RBM5	P52756	815 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	OTUD7B	Q6GQQ9	843 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	DZIP1L	Q8IYY4	767 aa	Known RBP	11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	ARMC5	Q96C12	935 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	TTF2	Q9UNY4	1162 aa	Known RBP	11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	PTPN22	Q9Y2R2	807 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	RIPOR2	Q9Y4F9	1068 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	CENPF	P49454	3210 aa		11.11	□□□□□ -0.63
SORT1-208	ENST00000495777	ECM29	Q5VYK3	1845 aa		11.1	□□□□□ -0.63
SORT1-208	ENST00000495777	CAP1	Q01518	475 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms