RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 PCDH12Q9NPG4 1184 aa10.87□□□□□ -0.67
RPSA-209ENST00000495394 EXOC1Q9NV70 894 aa10.87□□□□□ -0.67
RPSA-209ENST00000495394 CHMP5Q9NZZ3 219 aa10.87□□□□□ -0.67
RPSA-209ENST00000495394 C6orf203Q9P0P8 240 aaPredicted RBP10.87□□□□□ -0.67
RPSA-209ENST00000495394 TMEM238LA0A1B0GVL6 79 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.678e-8■■■□□ 17.5
RPSA-209ENST00000495394 KCNA6P17658 529 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 TSPAN7P41732 249 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 PDIA5Q14554 519 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 CFAP70Q5T0N1 1121 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 HHATQ5VTY9 493 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 SH3GL3Q99963 347 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 HDAC9Q9UKV0 1011 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 PTPRUQ92729 1446 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 FAM25EA8MYX2 175 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 HARSP12081 509 aaKnown RBP10.86□□□□□ -0.67
RPSA-209ENST00000495394 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
RPSA-209ENST00000495394 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
RPSA-209ENST00000495394 SAPCD2Q86UD0 394 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 TRIM42Q8IWZ5 723 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 ZFPM2Q8WW38 1151 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 SLC39A13Q96H72 371 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 TTC14Q96N46 770 aa10.86□□□□□ -0.67
RPSA-209ENST00000495394 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
RPSA-209ENST00000495394 XIRP1Q702N8 1843 aaKnown RBP10.86□□□□□ -0.67
RPSA-209ENST00000495394 MAP2K2P36507 400 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 TAF11Q15544 211 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 LMBRD2Q68DH5 695 aaPredicted RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 ALKBH2Q6NS38 261 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 THOC1Q96FV9 657 aaKnown RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 TACO1Q9BSH4 297 aaKnown RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 CRACR2AQ9BSW2 395 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 SLC7A5P2Q9GIP4 190 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 KMT5AQ9NQR1 393 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 GPRASP1Q5JY77 1395 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 TECPR2O15040 1411 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 PTCH1Q13635 1447 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 YTHDC2Q9H6S0 1430 aaKnown RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 E2F6O75461 281 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 SASH1O94885 1247 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 ATP2B3Q16720 1220 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 HELQQ8TDG4 1101 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 HDAC7Q8WUI4 952 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 GSDMAQ96QA5 445 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 SLC39A3Q9BRY0 314 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 DDX56Q9NY93 547 aaKnown RBP10.85□□□□□ -0.67
RPSA-209ENST00000495394 SPATA7Q9P0W8 599 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 POLG2Q9UHN1 485 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 ATP8A1Q9Y2Q0 1164 aa10.85□□□□□ -0.67
RPSA-209ENST00000495394 LRPPRCP42704 1394 aaKnown RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 ARHGEF28Q8N1W1 1705 aaKnown RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 SLFN14P0C7P3 912 aa10.84□□□□□ -0.67
RPSA-209ENST00000495394 RPS6KA3P51812 740 aa10.84□□□□□ -0.67
RPSA-209ENST00000495394 SFMBT2Q5VUG0 894 aa10.84□□□□□ -0.67
RPSA-209ENST00000495394 CCBE1Q6UXH8 406 aaPredicted RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 NPAS4Q8IUM7 802 aa10.84□□□□□ -0.67
RPSA-209ENST00000495394 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 CUEDC1Q9NWM3 386 aaPredicted RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 SEL1LQ9UBV2 794 aa10.84□□□□□ -0.67
RPSA-209ENST00000495394 XPO7Q9UIA9 1087 aaKnown RBP10.84□□□□□ -0.67
RPSA-209ENST00000495394 DLC1Q96QB1 1528 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 ANKRD20A12PQ8NF67 263 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 SH3TC2Q8TF17 1288 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 CLIC5Q9NZA1 410 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 LRRC7Q96NW7 1537 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 IFRD1O00458 451 aaPredicted RBP10.83□□□□□ -0.68
RPSA-209ENST00000495394 KIAA0754O94854 1291 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 HOXC13P31276 330 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 BIRC3Q13489 604 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 CCDC158Q5M9N0 1113 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 C10orf62Q5T681 223 aaPredicted RBP10.83□□□□□ -0.68
RPSA-209ENST00000495394 TMEM132EQ6IEE7 984 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 QPCTLQ9NXS2 382 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 ABCC11Q96J66 1382 aa10.83□□□□□ -0.68
RPSA-209ENST00000495394 FOSP01100 380 aaPredicted RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 TAF7Q15545 349 aaPredicted RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 PACS1Q6VY07 963 aa10.82□□□□□ -0.68
RPSA-209ENST00000495394 CCDC65Q8IXS2 484 aa10.82□□□□□ -0.68
RPSA-209ENST00000495394 APPL2Q8NEU8 664 aa10.82□□□□□ -0.68
RPSA-209ENST00000495394 FAM163AQ96GL9 167 aaPredicted RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 MAK16Q9BXY0 300 aaKnown RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 R3HCC1Q9Y3T6 440 aaKnown RBP10.82□□□□□ -0.68
RPSA-209ENST00000495394 TBC1D12O60347 775 aa10.81□□□□□ -0.68
RPSA-209ENST00000495394 MTRF1O75570 445 aaKnown RBP10.81□□□□□ -0.68
RPSA-209ENST00000495394 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
RPSA-209ENST00000495394 RECKO95980 971 aa10.81□□□□□ -0.68
RPSA-209ENST00000495394 RPN1P04843 607 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms