RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CNNM1Q9NRU3 951 aa29.42■■■□□ 2.3
COL27A1-208ENST00000494780 COL1A1P02452 1464 aaPredicted RBP29.42■■■□□ 2.3
COL27A1-208ENST00000494780 MLLT1Q03111 559 aaPredicted RBP29.41■■■□□ 2.3
COL27A1-208ENST00000494780 SLC4A10Q6U841 1118 aa29.41■■■□□ 2.3
COL27A1-208ENST00000494780 ARMC9Q7Z3E5 817 aa29.41■■■□□ 2.3
COL27A1-208ENST00000494780 PLIN1O60240 522 aa29.39■■■□□ 2.3
COL27A1-208ENST00000494780 ZNF521Q96K83 1311 aa29.39■■■□□ 2.3
COL27A1-208ENST00000494780 TM4SF4P48230 202 aa29.38■■■□□ 2.29
COL27A1-208ENST00000494780 PTPN12Q05209 780 aaKnown RBP29.37■■■□□ 2.29
COL27A1-208ENST00000494780 DEFB129Q9H1M3 183 aa29.37■■■□□ 2.29
COL27A1-208ENST00000494780 PPP2R3BQ9Y5P8 575 aa29.37■■■□□ 2.29
COL27A1-208ENST00000494780 PRKG1Q13976 671 aa29.36■■■□□ 2.29
COL27A1-208ENST00000494780 CFAP100Q494V2 611 aa29.36■■■□□ 2.29
COL27A1-208ENST00000494780 LDLRAD1Q5T700 205 aa29.36■■■□□ 2.29
COL27A1-208ENST00000494780 CTU1Q7Z7A3 348 aaKnown RBP29.36■■■□□ 2.29
COL27A1-208ENST00000494780 SUCLG2Q96I99 432 aa29.36■■■□□ 2.29
COL27A1-208ENST00000494780 F8W031 263 aaPredicted RBP29.35■■■□□ 2.29
COL27A1-208ENST00000494780 MYO1BO43795 1136 aa29.35■■■□□ 2.29
COL27A1-208ENST00000494780 UBE4AQ14139 1066 aa29.35■■■□□ 2.29
COL27A1-208ENST00000494780 ANGEL1Q9UNK9 670 aaKnown RBP29.35■■■□□ 2.29
COL27A1-208ENST00000494780 SPDYE2BA6NHP3 402 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 SPDYE6P0CI01 402 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 SREBF2Q12772 1141 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 KAZALD1Q96I82 304 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 UTYO14607 1347 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 FAM205AQ6ZU69 1335 aa29.34■■■□□ 2.29
COL27A1-208ENST00000494780 JAG2Q9Y219 1238 aa29.33■■■□□ 2.29
COL27A1-208ENST00000494780 PCDHAC2Q9Y5I4 1007 aa29.33■■■□□ 2.29
COL27A1-208ENST00000494780 ECM29Q5VYK3 1845 aa29.33■■■□□ 2.29
COL27A1-208ENST00000494780 TBC1D8O95759 1140 aa29.32■■■□□ 2.28
COL27A1-208ENST00000494780 NBPF7P0C2Y1 421 aaPredicted RBP29.32■■■□□ 2.28
COL27A1-208ENST00000494780 MAP3K11Q16584 847 aa29.32■■■□□ 2.28
COL27A1-208ENST00000494780 TDRD7Q8NHU6 1098 aaKnown RBP29.32■■■□□ 2.28
COL27A1-208ENST00000494780 PRMT6Q96LA8 375 aaPredicted RBP29.32■■■□□ 2.28
COL27A1-208ENST00000494780 MKRN3Q13064 507 aaKnown RBP29.31■■■□□ 2.28
COL27A1-208ENST00000494780 SPRYD7Q5W111 196 aa29.31■■■□□ 2.28
COL27A1-208ENST00000494780 MRPL50Q8N5N7 158 aaKnown RBP29.31■■■□□ 2.28
COL27A1-208ENST00000494780 PUS3Q9BZE2 481 aaKnown RBP29.31■■■□□ 2.28
COL27A1-208ENST00000494780 CLRN2A0PK11 232 aa29.3■■■□□ 2.28
COL27A1-208ENST00000494780 PPP1R12BO60237 982 aaPredicted RBP29.3■■■□□ 2.28
COL27A1-208ENST00000494780 HIBADHP31937 336 aaKnown RBP29.3■■■□□ 2.28
COL27A1-208ENST00000494780 NOM1Q5C9Z4 860 aaKnown RBP29.3■■■□□ 2.28
COL27A1-208ENST00000494780 MROH5Q6ZUA9 1318 aa29.29■■■□□ 2.28
COL27A1-208ENST00000494780 GYG1P46976 350 aa29.29■■■□□ 2.28
COL27A1-208ENST00000494780 RABL6Q3YEC7 729 aaPredicted RBP29.29■■■□□ 2.28
COL27A1-208ENST00000494780 SUPT20HL1Q3ZLR7 823 aa29.29■■■□□ 2.28
COL27A1-208ENST00000494780 ZNF296Q8WUU4 475 aaPredicted RBP29.29■■■□□ 2.28
COL27A1-208ENST00000494780 FAM84BQ96KN1 310 aaPredicted RBP29.29■■■□□ 2.28
COL27A1-208ENST00000494780 RIPOR2Q9Y4F9 1068 aa29.29■■■□□ 2.28
COL27A1-208ENST00000494780 PTPRCP08575 1304 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 SSC5DA1L4H1 1573 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 UNCXA6NJT0 531 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 RBM5P52756 815 aaKnown RBP eCLIP29.28■■■□□ 2.282e-6■■□□□ 12.9
COL27A1-208ENST00000494780 MFSD14BQ5SR56 506 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 CFHR5Q9BXR6 569 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 BICC1Q9H694 974 aaKnown RBP29.28■■■□□ 2.28
COL27A1-208ENST00000494780 VEZTQ9HBM0 779 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 FZD1Q9UP38 647 aa29.28■■■□□ 2.28
COL27A1-208ENST00000494780 PKN2Q16513 984 aaKnown RBP29.27■■■□□ 2.28
COL27A1-208ENST00000494780 SLC10A4Q96EP9 437 aa29.27■■■□□ 2.28
COL27A1-208ENST00000494780 E9PSI1 815 aa29.26■■■□□ 2.27
COL27A1-208ENST00000494780 GPR25O00155 361 aa29.26■■■□□ 2.27
COL27A1-208ENST00000494780 SERPINA10Q9UK55 444 aa29.26■■■□□ 2.27
COL27A1-208ENST00000494780 AOX1Q06278 1338 aa29.25■■■□□ 2.27
COL27A1-208ENST00000494780 INHBEP58166 350 aa29.25■■■□□ 2.27
COL27A1-208ENST00000494780 TTF2Q9UNY4 1162 aaKnown RBP29.25■■■□□ 2.27
COL27A1-208ENST00000494780 MANSC4A6NHS7 340 aaPredicted RBP29.24■■■□□ 2.27
COL27A1-208ENST00000494780 ALDH1A1P00352 501 aa29.24■■■□□ 2.27
COL27A1-208ENST00000494780 ZBTB48P10074 688 aaPredicted RBP29.24■■■□□ 2.27
COL27A1-208ENST00000494780 NBPF12Q5TAG4 269 aaPredicted RBP29.24■■■□□ 2.27
COL27A1-208ENST00000494780 ANKRD44Q8N8A2 993 aa29.24■■■□□ 2.27
COL27A1-208ENST00000494780 TNFAIP1Q13829 316 aa29.23■■■□□ 2.27
COL27A1-208ENST00000494780 RASA3Q14644 834 aa29.23■■■□□ 2.27
COL27A1-208ENST00000494780 IREB2P48200 963 aaKnown RBP29.22■■■□□ 2.27
COL27A1-208ENST00000494780 SPDYE2Q495Y8 402 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 FBXO33Q7Z6M2 555 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 VPS37DQ86XT2 251 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 SSH1Q8WYL5 1049 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 WNK4Q96J92 1243 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 CLMNQ96JQ2 1002 aa29.22■■■□□ 2.27
COL27A1-208ENST00000494780 ZNF70Q9UC06 446 aaPredicted RBP29.22■■■□□ 2.27
COL27A1-208ENST00000494780 ARAP2Q8WZ64 1704 aa29.21■■■□□ 2.27
COL27A1-208ENST00000494780 LRRC24Q50LG9 513 aa29.21■■■□□ 2.27
COL27A1-208ENST00000494780 METTL24Q5JXM2 366 aa29.21■■■□□ 2.27
COL27A1-208ENST00000494780 HPS5Q9UPZ3 1129 aa29.21■■■□□ 2.27
COL27A1-208ENST00000494780 FKTNO75072 461 aa29.2■■■□□ 2.26
COL27A1-208ENST00000494780 USP2O75604 605 aaPredicted RBP29.2■■■□□ 2.26
COL27A1-208ENST00000494780 SOX10P56693 466 aa29.2■■■□□ 2.26
COL27A1-208ENST00000494780 PDE8BO95263 885 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 SLFN5Q08AF3 891 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 CAVIN4Q5BKX8 364 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 IFNL1Q8IU54 200 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 DZIP1LQ8IYY4 767 aaKnown RBP29.19■■■□□ 2.26
COL27A1-208ENST00000494780 VGLL2Q8N8G2 317 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 USP44Q9H0E7 712 aa29.19■■■□□ 2.26
COL27A1-208ENST00000494780 TDRD3Q9H7E2 651 aaKnown RBP29.19■■■□□ 2.26
COL27A1-208ENST00000494780 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.19■■■□□ 2.26
COL27A1-208ENST00000494780 CRKP46108 304 aa29.18■■■□□ 2.26
COL27A1-208ENST00000494780 ANKRD13AQ8IZ07 590 aa29.18■■■□□ 2.26
COL27A1-208ENST00000494780 TBC1D22AQ8WUA7 517 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms