RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OSGEPQ9NPF4 335 aa8.16□□□□□ -1.1
SMC4-224ENST00000494612 C8AP07357 584 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 FAM20CQ8IXL6 584 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 HELQQ8TDG4 1101 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 EDEM1Q92611 657 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
SMC4-224ENST00000494612 WDR64B1ANS9 1081 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 PDGFAP04085 211 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 BMP3P12645 472 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 CES1P23141 567 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 AEBP1Q8IUX7 1158 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
SMC4-224ENST00000494612 PDE2AO00408 941 aaPredicted RBP8.13□□□□□ -1.11
SMC4-224ENST00000494612 TRPA1O75762 1119 aa8.13□□□□□ -1.11
SMC4-224ENST00000494612 DNM1Q05193 864 aaKnown RBP8.13□□□□□ -1.11
SMC4-224ENST00000494612 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
SMC4-224ENST00000494612 NOM1Q5C9Z4 860 aaKnown RBP8.13□□□□□ -1.11
SMC4-224ENST00000494612 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
SMC4-224ENST00000494612 PIM2Q9P1W9 311 aa8.13□□□□□ -1.11
SMC4-224ENST00000494612 SOX13Q9UN79 622 aa8.13□□□□□ -1.11
SMC4-224ENST00000494612 A6NHS1 94 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
SMC4-224ENST00000494612 CABP4P57796 275 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 ANKRD34AQ69YU3 496 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 PMEPA1Q969W9 287 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 RNF208Q9H0X6 261 aa8.12□□□□□ -1.11
SMC4-224ENST00000494612 MEGF11A6BM72 1044 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 EIF1AXP47813 144 aaKnown RBP8.11□□□□□ -1.11
SMC4-224ENST00000494612 PREPP48147 710 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 TMEM102Q8N9M5 508 aaPredicted RBP8.11□□□□□ -1.11
SMC4-224ENST00000494612 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 TRAIPQ9BWF2 469 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 HIF3AQ9Y2N7 669 aa8.11□□□□□ -1.11
SMC4-224ENST00000494612 PCSK2P16519 638 aa8.1□□□□□ -1.11
SMC4-224ENST00000494612 HOXA10P31260 410 aaPredicted RBP8.1□□□□□ -1.11
SMC4-224ENST00000494612 NLRP12P59046 1061 aa8.1□□□□□ -1.11
SMC4-224ENST00000494612 GTF3C2Q8WUA4 911 aaPredicted RBP8.1□□□□□ -1.11
SMC4-224ENST00000494612 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
SMC4-224ENST00000494612 FBXL18Q96ME1 805 aa8.1□□□□□ -1.11
SMC4-224ENST00000494612 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
SMC4-224ENST00000494612 TMEM88BA6NKF7 163 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 NPR3P17342 541 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 MPSTP25325 297 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 C8orf34Q49A92 452 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 VN1R5Q7Z5H4 357 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 KRTAP4-2Q9BYR5 136 aa8.09□□□□□ -1.11
SMC4-224ENST00000494612 SOX1O00570 391 aaPredicted RBP8.08□□□□□ -1.12
SMC4-224ENST00000494612 SSFA2P28290 1259 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 TP53INP2Q8IXH6 220 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 SLC7A3Q8WY07 619 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 BSNDQ8WZ55 320 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 OSMRQ99650 979 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
SMC4-224ENST00000494612 EREGO14944 169 aa8.07□□□□□ -1.12
SMC4-224ENST00000494612 JUNBP17275 347 aaPredicted RBP8.07□□□□□ -1.12
SMC4-224ENST00000494612 FDX2Q6P4F2 183 aa8.07□□□□□ -1.12
SMC4-224ENST00000494612 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
SMC4-224ENST00000494612 CCDC39Q9UFE4 941 aa8.07□□□□□ -1.12
SMC4-224ENST00000494612 POLIQ9UNA4 740 aa8.07□□□□□ -1.12
SMC4-224ENST00000494612 GAS2O43903 313 aaKnown RBP8.06□□□□□ -1.12
SMC4-224ENST00000494612 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 ARL4DP49703 201 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 MTMR3Q13615 1198 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 CBLL1Q75N03 491 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 OSBPL1AQ9BXW6 950 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
SMC4-224ENST00000494612 DLGAP3O95886 979 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 FOSL1P15407 271 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 PDE4CQ08493 712 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 IKBKEQ14164 716 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 CPSF6Q16630 551 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMC4-224ENST00000494612 VSIG10LQ86VR7 867 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 SMG8Q8ND04 991 aaKnown RBP8.05□□□□□ -1.12
SMC4-224ENST00000494612 TTC16Q8NEE8 873 aa8.05□□□□□ -1.12
SMC4-224ENST00000494612 BHLHE41Q9C0J9 482 aaPredicted RBP8.05□□□□□ -1.12
SMC4-224ENST00000494612 TIAF1O95411 115 aa8.04□□□□□ -1.12
SMC4-224ENST00000494612 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
SMC4-224ENST00000494612 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
SMC4-224ENST00000494612 SOX17Q9H6I2 414 aaPredicted RBP8.04□□□□□ -1.12
SMC4-224ENST00000494612 LOC100289279A0A1B0GTE1 492 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 PHACTR2O75167 634 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 PRNPP04156 253 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 EDN3P14138 238 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 RXRBP28702 533 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 SGO2Q562F6 1265 aa8.03□□□□□ -1.12
SMC4-224ENST00000494612 FOXD3Q9UJU5 478 aaPredicted RBP8.03□□□□□ -1.12
SMC4-224ENST00000494612 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
SMC4-224ENST00000494612 FZD6O60353 706 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms