RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 MEIS3Q99687 375 aa17.57■□□□□ 0.4
VTI1A-206ENST00000489142 HDAC9Q9UKV0 1011 aa17.57■□□□□ 0.4
VTI1A-206ENST00000489142 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
VTI1A-206ENST00000489142 KIF16BQ96L93 1317 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 PITPNM2Q9BZ72 1349 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 HIBADHP31937 336 aaKnown RBP17.56■□□□□ 0.4
VTI1A-206ENST00000489142 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 C2orf69Q8N8R5 385 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
VTI1A-206ENST00000489142 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 SIL1Q9H173 461 aa17.56■□□□□ 0.4
VTI1A-206ENST00000489142 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
VTI1A-206ENST00000489142 LBX1P52954 281 aa17.55■□□□□ 0.4
VTI1A-206ENST00000489142 MAP2K1Q02750 393 aaPredicted RBP17.55■□□□□ 0.4
VTI1A-206ENST00000489142 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
VTI1A-206ENST00000489142 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
VTI1A-206ENST00000489142 AOX1Q06278 1338 aa17.54■□□□□ 0.4
VTI1A-206ENST00000489142 PAPPA2Q9BXP8 1791 aa17.54■□□□□ 0.4
VTI1A-206ENST00000489142 PDE8BO95263 885 aa17.54■□□□□ 0.4
VTI1A-206ENST00000489142 CTCFP49711 727 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-206ENST00000489142 PTPN12Q05209 780 aaKnown RBP17.54■□□□□ 0.4
VTI1A-206ENST00000489142 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
VTI1A-206ENST00000489142 TDRD7Q8NHU6 1098 aaKnown RBP17.54■□□□□ 0.4
VTI1A-206ENST00000489142 ZBED3Q96IU2 234 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-206ENST00000489142 HHIPL1Q96JK4 782 aa17.54■□□□□ 0.4
VTI1A-206ENST00000489142 EYA2O00167 538 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 HSPA8P11142 646 aaKnown RBP17.53■□□□□ 0.4
VTI1A-206ENST00000489142 TRIM27P14373 513 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-206ENST00000489142 DLGAP5Q15398 846 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 RGMBQ6NW40 437 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 CLUAP1Q96AJ1 413 aa17.53■□□□□ 0.4
VTI1A-206ENST00000489142 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
VTI1A-206ENST00000489142 CLRN2A0PK11 232 aa17.52■□□□□ 0.4
VTI1A-206ENST00000489142 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.4
VTI1A-206ENST00000489142 BCAMP50895 628 aa17.52■□□□□ 0.4
VTI1A-206ENST00000489142 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
VTI1A-206ENST00000489142 RBM5P52756 815 aaKnown RBP eCLIP17.52■□□□□ 0.4
VTI1A-206ENST00000489142 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
VTI1A-206ENST00000489142 INTS3Q68E01 1043 aaKnown RBP17.52■□□□□ 0.4
VTI1A-206ENST00000489142 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.4
VTI1A-206ENST00000489142 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
VTI1A-206ENST00000489142 FAM205AQ6ZU69 1335 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 CAPN15O75808 1086 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 MAP2K2P36507 400 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 PRKG1Q13976 671 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 TTLL12Q14166 644 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-206ENST00000489142 PUM3Q15397 648 aaKnown RBP17.51■□□□□ 0.39
VTI1A-206ENST00000489142 GRIK5Q16478 980 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 FBXO33Q7Z6M2 555 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 BEGAINQ9BUH8 593 aa17.51■□□□□ 0.39
VTI1A-206ENST00000489142 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
VTI1A-206ENST00000489142 FRAT2O75474 233 aaPredicted RBP17.5■□□□□ 0.39
VTI1A-206ENST00000489142 FGFR2P21802 821 aa17.5■□□□□ 0.39
VTI1A-206ENST00000489142 FKBP1AP62942 108 aaKnown RBP17.5■□□□□ 0.39
VTI1A-206ENST00000489142 CAVIN4Q5BKX8 364 aa17.5■□□□□ 0.39
VTI1A-206ENST00000489142 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
VTI1A-206ENST00000489142 APOBEC3FQ8IUX4 373 aaKnown RBP17.5■□□□□ 0.39
VTI1A-206ENST00000489142 PRMT6Q96LA8 375 aaPredicted RBP17.5■□□□□ 0.39
VTI1A-206ENST00000489142 TTF2Q9UNY4 1162 aaKnown RBP17.5■□□□□ 0.39
VTI1A-206ENST00000489142 FZD1Q9UP38 647 aa17.5■□□□□ 0.39
VTI1A-206ENST00000489142 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
VTI1A-206ENST00000489142 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
VTI1A-206ENST00000489142 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
VTI1A-206ENST00000489142 MMP14P50281 582 aa17.49■□□□□ 0.39
VTI1A-206ENST00000489142 NOGQ13253 232 aa17.49■□□□□ 0.39
VTI1A-206ENST00000489142 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
VTI1A-206ENST00000489142 SLC10A3P09131 477 aa17.48■□□□□ 0.39
VTI1A-206ENST00000489142 IFIT1P09914 478 aaKnown RBP17.48■□□□□ 0.39
VTI1A-206ENST00000489142 SLC5A1P13866 664 aa17.48■□□□□ 0.39
VTI1A-206ENST00000489142 RASAL3Q86YV0 1011 aa17.48■□□□□ 0.39
VTI1A-206ENST00000489142 MTMR14Q8NCE2 650 aa17.48■□□□□ 0.39
VTI1A-206ENST00000489142 PRDM10Q9NQV6 1147 aa17.48■□□□□ 0.39
VTI1A-206ENST00000489142 COL1A1P02452 1464 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-206ENST00000489142 GNAI3P08754 354 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 KIF23Q02241 960 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-206ENST00000489142 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 CCDC102AQ96A19 550 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 DEFB129Q9H1M3 183 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-206ENST00000489142 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
VTI1A-206ENST00000489142 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 SSC5DA1L4H1 1573 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 SRGAP3O43295 1099 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 MYO1BO43795 1136 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 CIAO1O76071 339 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 NF2P35240 595 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 ATP2B3Q16720 1220 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 LPIN2Q92539 896 aa17.46■□□□□ 0.39
VTI1A-206ENST00000489142 CRKP46108 304 aa17.45■□□□□ 0.38
VTI1A-206ENST00000489142 FKBP1BP68106 108 aa17.45■□□□□ 0.38
VTI1A-206ENST00000489142 MKRN3Q13064 507 aaKnown RBP17.45■□□□□ 0.38
VTI1A-206ENST00000489142 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
VTI1A-206ENST00000489142 TDRD3Q9H7E2 651 aaKnown RBP17.45■□□□□ 0.38
VTI1A-206ENST00000489142 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
VTI1A-206ENST00000489142 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
VTI1A-206ENST00000489142 ADORA1P30542 326 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms