RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 GPRC5DQ9NZD1 345 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 SEPT9Q9UHD8 586 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 SERPINA10Q9UK55 444 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 PCDHGC3Q9UN70 934 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 MTMR7Q9Y216 660 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 ZBTB1Q9Y2K1 713 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 TM4SF4P48230 202 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 TEFQ10587 303 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 TBC1D9BQ66K14 1250 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 NIM1KQ8IY84 436 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 SYNE4Q8N205 404 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 NFATC2IPQ8NCF5 419 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 JDP2Q8WYK2 163 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 FBXW7Q969H0 707 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 KCTD12Q96CX2 325 aaKnown RBP3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 COL2A1P02458 1487 aaPredicted RBP3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 KIF16BQ96L93 1317 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 MYH3P11055 1940 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 EP400Q96L91 3159 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 MAP4K4O95819 1239 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 RASSF7Q02833 373 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 CALD1Q05682 793 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 SREBF2Q12772 1141 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 TAF7Q15545 349 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 HDGFL1Q5TGJ6 251 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 SULT6B1Q6IMI4 303 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 TMED8Q6PL24 325 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 KIF6Q6ZMV9 814 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 DZIP3Q86Y13 1208 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 CNTROBQ8N137 903 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 NBPF15Q8N660 670 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 USHBP1Q8N6Y0 703 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 TTC13Q8NBP0 860 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 CAPNS2Q96L46 248 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 MED23Q9ULK4 1368 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 PPEF1O14829 653 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 GPR37L1O60883 481 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 RNF40O75150 1001 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 NTSR2O95665 410 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 MTHFSDQ2M296 383 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 ARMC5Q96C12 935 aa3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 SRP68Q9UHB9 627 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-203ENST00000488146 COL4A5P29400 1685 aa3.59□□□□□ -1.84
DEPDC1-203ENST00000488146 SCNN1DP51172 638 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 GRAPQ13588 217 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 FBXO46Q6PJ61 603 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 LRP10Q7Z4F1 713 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 SAPCD2Q86UD0 394 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 NBPF5PQ86XG9 351 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 GRAPLQ8TC17 118 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 HOOK2Q96ED9 719 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 MRIQ9BWK5 157 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 PLA2G12BQ9BX93 195 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 PANK3Q9H999 370 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 FAM205AQ6ZU69 1335 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF541Q9H0D2 1346 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 FAM155AB1AL88 458 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 VIL1P09327 827 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 ZBTB48P10074 688 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 CHRNA5P30532 468 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 CIAPIN1Q6FI81 312 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 APOBEC3FQ8IUX4 373 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 TATDN2Q93075 761 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 VPS9D1Q9Y2B5 631 aa3.58□□□□□ -1.84
DEPDC1-203ENST00000488146 MANSC4A6NHS7 340 aaPredicted RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 LILRB3O75022 631 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 RGMBQ6NW40 437 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 IL17REQ8NFR9 667 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF804BA4D1E1 1349 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 BTBD11A6QL63 1104 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 H7C1D1 291 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 SPTLC1O15269 473 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 KDM4AO75164 1064 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 ATP2B4P23634 1241 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 FMR1Q06787 632 aaKnown RBP eCLIP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 NFE2L2Q16236 605 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 PPP2R2DQ66LE6 453 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 C2orf69Q8N8R5 385 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 RPGRQ92834 1020 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 ZBED3Q96IU2 234 aaPredicted RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 ISCA1Q9BUE6 129 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 UTP14AQ9BVJ6 771 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 SLC4A5Q9BY07 1137 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 TRIM34Q9BYJ4 488 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 SLC45A1Q9Y2W3 748 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 SUGT1Q9Y2Z0 365 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 IL16Q14005 1332 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 CFAP99D6REC4 459 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 NEFMP07197 916 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 HSPA5P11021 654 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 PTPREP23469 700 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 RBM25P49756 843 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 EIF4A1P60842 406 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 HDLBPQ00341 1268 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 RALBP1Q15311 655 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 PUS10Q3MIT2 529 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 FKBP1CQ5VVH2 108 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 RTF1Q92541 710 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 ERO1AQ96HE7 468 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 NLRP3Q96P20 1036 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms